EST details — SGN-E553045
| Search information |
| Request: 553045 | Match: SGN-E553045 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C331959 | Clone name: cTSB-5-N22 |
| ||
| Library Name: cTSB | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E553045 | Length: 857 bp (1222 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E553045 [] (trimmed)
GGAAATAGAACATGATTTTTTCCCATTGATGAGAGTTCACAAAGATGGTCGAATAGAGAGGCTGGCGGGCGAAGTTTTTGTCCCACCTGAATCTG
ATCCTGAAACCGGAGTACAAATCAAAGACGTTCAAATTGATCCACAAATTAACCTATCAGCAAGACTTTACCTGCCCAAAAATGTAGACCCGGTT
CAGAAAATTCCCCTTTTCGTCTACTTTCACGGCGGTGGCTTTGTTATCGAATCTGCTTTTTCACCTACCTATCACAAATATCTAAGCCTGGTAGC
AGCTAAAACAAAAGTCGCCATCATCTCAGTTAACTATAGGTTAGCTCCTGAGTACCCGTTACCCATAGCTTATGAAGATTCATGGCTAGCTCTCA
AATGGGTCACTTCACATGCCAATGGTGATGGTCGTGAACCATGGTTAAAAGACAATGCCGATTTCAATCGTGTCTATTTGGGCGGAGATAGCGCG
GGTGGTAACATCGCACACCATATAGCCATTCGGGTCGGGTTGGAAAAGTTGGATAGAGTGAAAATTGATGGGATTTTCCTTGCCTGTCCATCTTT
CTGGGGGAAGGATCCGATTGACGGTGAGGGGGAAATCGTGGGTGCCAAGGATTTCGTTGAGAAGCTATGGTTGTTTGCGAATCCGAATAGCTCGG
GATTAGATGACCCGTTGATTAACCCGGAAAAGGATCCGAATCTGTCTAGATTAGGATGTGATAAAGTAGTTGTATATGTGGCCGGAAAAGATCTC
TTGAGATTCAGGGGATTATACTATAAGGAGGTGTTGGAGAAGAGTGGGTGGCCGGGGACGGTGGAGGTTGTGGAAGTTAAAGATGAAGAACATGT
AT
ATCCTGAAACCGGAGTACAAATCAAAGACGTTCAAATTGATCCACAAATTAACCTATCAGCAAGACTTTACCTGCCCAAAAATGTAGACCCGGTT
CAGAAAATTCCCCTTTTCGTCTACTTTCACGGCGGTGGCTTTGTTATCGAATCTGCTTTTTCACCTACCTATCACAAATATCTAAGCCTGGTAGC
AGCTAAAACAAAAGTCGCCATCATCTCAGTTAACTATAGGTTAGCTCCTGAGTACCCGTTACCCATAGCTTATGAAGATTCATGGCTAGCTCTCA
AATGGGTCACTTCACATGCCAATGGTGATGGTCGTGAACCATGGTTAAAAGACAATGCCGATTTCAATCGTGTCTATTTGGGCGGAGATAGCGCG
GGTGGTAACATCGCACACCATATAGCCATTCGGGTCGGGTTGGAAAAGTTGGATAGAGTGAAAATTGATGGGATTTTCCTTGCCTGTCCATCTTT
CTGGGGGAAGGATCCGATTGACGGTGAGGGGGAAATCGTGGGTGCCAAGGATTTCGTTGAGAAGCTATGGTTGTTTGCGAATCCGAATAGCTCGG
GATTAGATGACCCGTTGATTAACCCGGAAAAGGATCCGAATCTGTCTAGATTAGGATGTGATAAAGTAGTTGTATATGTGGCCGGAAAAGATCTC
TTGAGATTCAGGGGATTATACTATAAGGAGGTGTTGGAGAAGAGTGGGTGGCCGGGGACGGTGGAGGTTGTGGAAGTTAAAGATGAAGAACATGT
AT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E553045] | SGN-U568101 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T355730 [Download] [View] | Facility Assigned ID: ctsb5n22 |
| Submitter: Koni | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0037 | Quality Trim Threshold: 14.5 |
Working
