Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E553352

Search information 
Request: 553352Match: SGN-E553352
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C331699Clone name: cTSB-5-C4
nocartOrdering Not Available
Library Name: cTSBOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E553352Length: 511 bp (1321 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E553352 [] (trimmed) GACTTCTCATTCATAACCAAGTTGGAGGTCTCCAGGTTCAACATCAAGGCAAATGGATTAACGTCAAGGCCCTTCCTAACTACTCTCTCTTGGTT
AATACCGGCGATCATCTCGAGATATTTAGTAATGGGAAGTACAAGAGCAACATGCATAGAGCAGTGGTGAACAACAAAGTAACAAGGATATCAGT
AGTGGTAGCTCATGGTCCATCATTAGACACAATTGTAAAGCCAGCTTCTCCATTGATGGAAAAAGAGAACAGCCCATCAGCTAATTATATTCCAA
TGAAGTACAAGGATTACTTGGAGATGCAACAAAGCAGCCGAATTTATGGAAAGTCCTGCTTGGAAAAAGTTAAAATCCAAAGGAGCTGAGTGTTT
CTATGTATATTTTCCTCTTGTTTCCAAGTGTTTGATGATATAAAAGTATTATGGAACTTCAATAATATTTATGAATACTATAGTTGTACGTGTAA
TCTTTTAATTAGTGAACGTTTTAGCCGTGTCTGTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E553352] SGN-U579869 Tomato 200607 Build 2 86 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T355470 [Download] [View] Facility Assigned ID: ctsb5c4
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.934 Expected Error Rate: 0.0079 Quality Trim Threshold: 14.5