EST details — SGN-E553479

Search information 
Request: 553479Match: SGN-E553479
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C332103Clone name: cTSC-1-D8
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E553479Length: 810 bp (1361 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E553479 [] (trimmed) GCAAGTGCACTTTCAAAGCCTGAAGATCCATTTGATCACCGTAAGCTCTTTGGTTTCCGCACACGCTCACCACCTCTTCCCTACATGCTTTCTTC
AATGTTGCAGTCACGTGCGCATCCAAAGCTTTCTGCTGAGCAGGGTGGTGACAACGGTGATTCAGACATTGACTTAGATGATTTGTCAGACTCTG
ACCAAGAAGAAGAAGATGAGTATGACCAGCTTCCTCCCTTCAAGCCTCTTCGGAAGGCTCAGCTTGCTAAGCTCAGCAAAGAACAGAGGAAGGCG
TACTTTGAGGAGTATGACTACAGGGTCAAGCTCCTTCAGAAGAAACAGTTGAGAGAAGATTTAAAAAGAATGAAAGAGATGAAAAGTAAGGGAAA
AGAGGCTGCAATTGACAATGGTTATGCAGAGGAAGAAGCTGATGCAGGTGCAGCAGCTCCCGTAGCAGTTCCCCTTCCTGACATGGCCCTTCCAC
CTTCTTTTGATAGTGATAATCCCGCCTATAGGTACCGCTTCTTGGAGCCCACATCACAGTTCCTTGCAAGGCCTGTTCTGGACACGCATGGTTGG
GATCATGATTGTGGCTATGATGGTGTTAACGTGGAACAAAGTTTAGCCATTGCCAGTCGTTTCCCTGCTGCAGTTACTGTGCAAATCACCAAAGA
TAAGAAGGATTTCAGTATCAATTTGGACTCTTCGATTGCTGCTAAGCACGGAGAAAATGGATCAACCATGGCTGGCTTTGATATTCAAAGCATAG
GGAAGCAACTTGCCTATATTGTCCGAGGAGAAACCAAATTCNAAAGCTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E553479] SGN-U571197 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T355874 [Download] [View] Facility Assigned ID: ctsc1d8
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0125 Quality Trim Threshold: 14.5