EST details — SGN-E553497

Search information 
Request: 553497Match: SGN-E553497
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C332125Clone name: cTSC-1-E6
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E553497Length: 700 bp (1302 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E553497 [] (trimmed) TTAGTTTCAGGAAAGCAACAAAGGATGATATGTTCTTTCACTGAAAAGCTTGCTCGACTTGTCTTTATAAGAGTCTGATTATTGCCTCTCCAAAA
CCCAAAGAGGATCACAGAATTCTACAACCTTGAAACTAGTCAAATGACAAGGGGCAAGTGTACCTTCGATTTTGATGAACAAATTCAAACTAACA
ATGTGGTGTACCGAGTTTAACTCGACATTGGATGATTATAAACATACTCAATAGCCTGTTCGCATGACTCTATCCTCACAGCTTCCTTGTCTGGA
ATCTCCAGTTTGAACTCTTCCTCCAGAGCCATTACAATCTCTACCGTATCTAAGCTGTCTAAGCCCAAATCCTTCTCAAAGTGGACTTCAGGGGT
CACCTTGGAAGGGTCGACTTTAGGGAAGCACTTGACGACATCAAGGACTCTCTTGATGACTTCATCTTTGGTGATATGGTCATCGTGCGACGACA
TCAATCTGACAGCGGTTAGCCTCAATCCATTTGCCGATACAGCTTGGGTTGCCGGAATCCGGATGTGTCGGAGTATAGCAGATCTCAACGCCGAC
GCCATTGTTGTTCTCGTATTCTTTGTTATCCCTCTTCTGTTTAGCTTGTTGCGACTGGAAAAAAGTGTTGAATTAGACTGAGGTTTGAGGATTAA
TTTGGTATTTTACATCGTGATCCCTTGGACCGGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E553497] SGN-U570432 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T355896 [Download] [View] Facility Assigned ID: ctsc1e6
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0013 Quality Trim Threshold: 14.5