EST details — SGN-E553550

Search information 
Request: 553550Match: SGN-E553550
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C332189Clone name: cTSC-1-H20
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E553550Length: 845 bp (1263 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E553550 [] (trimmed) GGTTTCCAAGGAAGAAGTTAAGGGACTGGGGTTCGCGGCTACTTGTTCTCTTGTTGCTGTTGATTCTGAGGGTGAACCTGTCACGGTTTCATGGA
GTGGTGATACTAGAAGAAACATCATAGTGTGGATGGACCATAGAGCTGTAAAACAAGCTGAGAGGATCAACGCCTCTAATTCACCTGTACTACAG
TATTGTGGTGGAGGCGTGTCACCCGAGATGGAGCCACCAAAGCTCTTGTGGGTGAAGGAAAATCTCCAAGAATCCTGGTCGATGGCATTTAGATG
GATGGATCTAAGTGATTGGTTAACATACAAAGCAACAGGAGATGACACGAGGAGTTTATGCACCACTGTATGCAAATGGACATATCTAGGCCATG
CGCACATGCAGCAGATAAATGAGAAAGATTCCGGTGCTATGGAATCTTGTGGATGGGATGATGGATTCTGGGAGGAGATTGGTTTAGGTGATCTT
GTTGATGGGCATCATGCTAAGATAGGGCGAAGTGTAGCATTCCCCGGTCATGCATTGGGTTCGGGTTTAACACCACATGCTGCAAAGGAATTGGG
TCTGATGGCAGGGACACCAGTAGGTACTGCTCTGATAGATGCTCATGCTGGCGGTGTAGGTGTAATGGAAAGTGTGCCTGCATCAGATTCTGAAT
CTATAGTTGATGAGGATGCTATAAGTAGGCGTATGGTGCTTGTATGTGGTACTTCCACATGCCATATGGCTGTATCCAGGACAAAATTATTCATA
CCTGGAGTCTGGGGACCTTTTTGGTCAGCGATGGTGCCCGAGTACTGGCTTACTGAAGGAGGACAGAGTGCTACTGGTTCATTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E553550] SGN-U576663 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T355960 [Download] [View] Facility Assigned ID: ctsc1h20
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5