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EST details — SGN-E553917

Search information 
Request: 553917Match: SGN-E553917
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C332629Clone name: cTSC-2-K13
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E553917Length: 678 bp (1177 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E553917 [] (trimmed) GCAAGATCGGTGAAGATGACCAAACTTCATGCTTTTAACGACTTGTTGGAGCACAACAACAAAGATGATTGCTGGCTTCTCATCTCTGGAAAGGT
TTATGATGTAACCTCTTTTTTGGATGATCATCCTGGAGGTGATGAAGTGTTGCTAACTGCAACAGGCAAGGATGCGACAGATGATTTTGAAGATG
TCGGTCACAGTGATGATGCAAGAGAGATGTTGAAGAAATACTTCATTGGTGAAATTGACAGTTCCACCATTCCTGCAGAACGCAAACATACCCCG
CCTCCCTCAGCAACACCATCAGCTGGAGGACAGGGTTCTGGAAACTCATGGAAGCTATTGCAATTCTTGTTACCCTTGTTGATATTGGTTGCAGC
CCTTGCCTTCCGTTCCTTTTACCAGAAAGAATAGATCAGCCAGTTGTCATGTTTCAAGCTGTGACTGGATACCCTTGCAGCATGTCATTTCATAT
GTTGTGCTTTCCTATTCAGGTTATGTCTATTTGCTACCTTTGTTGGATGTCCTTTACTGGTATAATGAGATATTAAGATGTTAGGTCTGTGTTGG
TAATGTTGTCTTTTAGAATAAAAGTTATATGGTAAAAAACAAATGGTGTACTATGCAATTTGGTTCTTCCATGATTGCCATCATTTGTCTATTTT
CTATTACGTAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E553917] SGN-U563020 Tomato 200607 Build 2 41 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T356400 [Download] [View] Facility Assigned ID: ctsc2k13
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5