EST details — SGN-E554003
| Search information |
| Request: 554003 | Match: SGN-E554003 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C332732 | Clone name: cTSC-2-O20 |
| ||
| Library Name: cTSC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E554003 | Length: 836 bp (1191 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E554003 [] (trimmed)
GTGAAGACCTTATTCTCTTACATTACTGGCTATGATTCAAAATGTAATACAAAACCTCTTCAGTTTAGCTAGCGTATGGAATCACGTTCAGAAGT
GCCACCATGAAGACTACAATCAGAAGATCAAAAACTAGAAAGTAGAGGCCTAAAGTACAGTGTCTTAGGTAGTTCTCTCACGATCCTGACATAAA
TTGTTCATCAAGCAGCATTAGCCAAAGGTTCACTTTCATTTGATGCTTCAAGCCGCTGAAGTCCTTCGCCAACTTCCATTCTTAGAAAGCTTCCT
ATCTTAACTGGTGAACCAACATCCTTGGACAGATTGCTTAACAATGTCTTCACATTCATTGTGTCATTCACAATAAATTTCTGCTCCATCAAAAC
CACTTCCTCAAAATACTTGCGCAAACGACCTTCAACCATTTTTTCTACAGCAATCTGAGGCTTCCCAGAACTCTCTGCCTGAGATTTGAGAATCT
CGCGTTCATTGCTTAGCGCATCAGAGGAAACATCTTCTTTTGTTAAGAACAATGGCTTTGCAGCAACTACATGCATAGCTAATTCTGATCCAACA
CGCTGAAGTGCATCTTCTGAGACATTCTTATCTTCTACTTCAAGTGATAAAATTCCGGCAATACGTCCAACACCTGGTTGAGGGCTTGTATGTAG
ATACGTTGATATCACACCAAGAGATGGAGCAGACATTGCAAATCCCCTTCTTAGTTTGACATTCTCCCCCATCATTGCAGCTACTTCAGTTATTG
CATTTTGAACACTTTTTTCTCCACTCAATTTAGGGTGATCAAGGTTCAGCTTCAACTCCTCCAGATGTCCAATAGG
GCCACCATGAAGACTACAATCAGAAGATCAAAAACTAGAAAGTAGAGGCCTAAAGTACAGTGTCTTAGGTAGTTCTCTCACGATCCTGACATAAA
TTGTTCATCAAGCAGCATTAGCCAAAGGTTCACTTTCATTTGATGCTTCAAGCCGCTGAAGTCCTTCGCCAACTTCCATTCTTAGAAAGCTTCCT
ATCTTAACTGGTGAACCAACATCCTTGGACAGATTGCTTAACAATGTCTTCACATTCATTGTGTCATTCACAATAAATTTCTGCTCCATCAAAAC
CACTTCCTCAAAATACTTGCGCAAACGACCTTCAACCATTTTTTCTACAGCAATCTGAGGCTTCCCAGAACTCTCTGCCTGAGATTTGAGAATCT
CGCGTTCATTGCTTAGCGCATCAGAGGAAACATCTTCTTTTGTTAAGAACAATGGCTTTGCAGCAACTACATGCATAGCTAATTCTGATCCAACA
CGCTGAAGTGCATCTTCTGAGACATTCTTATCTTCTACTTCAAGTGATAAAATTCCGGCAATACGTCCAACACCTGGTTGAGGGCTTGTATGTAG
ATACGTTGATATCACACCAAGAGATGGAGCAGACATTGCAAATCCCCTTCTTAGTTTGACATTCTCCCCCATCATTGCAGCTACTTCAGTTATTG
CATTTTGAACACTTTTTTCTCCACTCAATTTAGGGTGATCAAGGTTCAGCTTCAACTCCTCCAGATGTCCAATAGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E554003] | SGN-U584457 | Tomato 200607 | Build 2 | 28 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T356503 [Download] [View] | Facility Assigned ID: ctsc2o20 |
| Submitter: Koni | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0025 | Quality Trim Threshold: 14.5 |
Working
