EST details — SGN-E554065
Search information |
Request: 554065 | Match: SGN-E554065 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C332807 | Clone name: cTSC-3-B8 |
| ||
Library Name: cTSC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E554065 | Length: 811 bp (1243 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E554065 [] (trimmed)
GATCTATCTCCACAAGTTTTATAATAAATTTGTACATTCGTATCTGCTTGCTATCTCAAAAAACAAAATAAGTCTATACAAAAGCTACCAGTTTT
AGAGAAAAAAAAGTCTATACATTCCCATTAACTCTTAAGGGCACAAAGGTTAAACCTTAAGCCTCCTTTGAGCAATGGATCTAGTTACAAAGTTT
TAACAGATCCCTGAATTCGTTTTTGCATGAACGTTTTACATTGAAGAACGAGCTCATTACAAAAAAAAATGTGTCTTCATAACTTGCTTGAGCTG
GAGATTGCCTGCTGCAGATATCTCAGTGTCTTTTGATGATTGAGGAATCCCATAAACCAGAACTCAAAATCATCCTCTGTAATTACTTGTATATA
CTTCTGTGATGGCTTTTGCATATTTTTGCTCTCTTTTGCTTTCATTATCTTACTTATTGGGATGGTTACCTTATAGTAGATTCTAAGCAACTTTC
CAGTTGGAGATAAGAGCTTTATTGATCTCTCGCTGCAGAAAGCAATCTTATCGGTAGAGATGAAGAGAAGGCCTGCTATTGGACCAGCTGTCGTT
GATAAATAGCATTGAGAAACATTCAATAGCTTTTCATCATCTCTAACACTGAACTTCTGCCTGAATATTTTCTCCAACCCTCCTACTTGAAGGAT
TTTTGCTCCAAGGCTCAATTTTCCCTTTAAAGTTTCTGTTAGTTTCGGGCTTACGCTCACATGCTCGCGGATGCTTTTTTACTAAACAATCCACC
CTTTTCTCCCATTTTGTTCATCTTACCAATGAACATATCTTCTCCTGGCTT
AGAGAAAAAAAAGTCTATACATTCCCATTAACTCTTAAGGGCACAAAGGTTAAACCTTAAGCCTCCTTTGAGCAATGGATCTAGTTACAAAGTTT
TAACAGATCCCTGAATTCGTTTTTGCATGAACGTTTTACATTGAAGAACGAGCTCATTACAAAAAAAAATGTGTCTTCATAACTTGCTTGAGCTG
GAGATTGCCTGCTGCAGATATCTCAGTGTCTTTTGATGATTGAGGAATCCCATAAACCAGAACTCAAAATCATCCTCTGTAATTACTTGTATATA
CTTCTGTGATGGCTTTTGCATATTTTTGCTCTCTTTTGCTTTCATTATCTTACTTATTGGGATGGTTACCTTATAGTAGATTCTAAGCAACTTTC
CAGTTGGAGATAAGAGCTTTATTGATCTCTCGCTGCAGAAAGCAATCTTATCGGTAGAGATGAAGAGAAGGCCTGCTATTGGACCAGCTGTCGTT
GATAAATAGCATTGAGAAACATTCAATAGCTTTTCATCATCTCTAACACTGAACTTCTGCCTGAATATTTTCTCCAACCCTCCTACTTGAAGGAT
TTTTGCTCCAAGGCTCAATTTTCCCTTTAAAGTTTCTGTTAGTTTCGGGCTTACGCTCACATGCTCGCGGATGCTTTTTTACTAAACAATCCACC
CTTTTCTCCCATTTTGTTCATCTTACCAATGAACATATCTTCTCCTGGCTT
Unigenes |
Current Unigene builds | |||||
[SGN-E554065] | SGN-U573355 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T356578 [Download] [View] | Facility Assigned ID: ctsc3b8 |
Submitter: Koni | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.949 | Expected Error Rate: 0.0089 | Quality Trim Threshold: 12.5 |