EST details — SGN-E554065

Search information 
Request: 554065Match: SGN-E554065
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C332807Clone name: cTSC-3-B8
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E554065Length: 811 bp (1243 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E554065 [] (trimmed) GATCTATCTCCACAAGTTTTATAATAAATTTGTACATTCGTATCTGCTTGCTATCTCAAAAAACAAAATAAGTCTATACAAAAGCTACCAGTTTT
AGAGAAAAAAAAGTCTATACATTCCCATTAACTCTTAAGGGCACAAAGGTTAAACCTTAAGCCTCCTTTGAGCAATGGATCTAGTTACAAAGTTT
TAACAGATCCCTGAATTCGTTTTTGCATGAACGTTTTACATTGAAGAACGAGCTCATTACAAAAAAAAATGTGTCTTCATAACTTGCTTGAGCTG
GAGATTGCCTGCTGCAGATATCTCAGTGTCTTTTGATGATTGAGGAATCCCATAAACCAGAACTCAAAATCATCCTCTGTAATTACTTGTATATA
CTTCTGTGATGGCTTTTGCATATTTTTGCTCTCTTTTGCTTTCATTATCTTACTTATTGGGATGGTTACCTTATAGTAGATTCTAAGCAACTTTC
CAGTTGGAGATAAGAGCTTTATTGATCTCTCGCTGCAGAAAGCAATCTTATCGGTAGAGATGAAGAGAAGGCCTGCTATTGGACCAGCTGTCGTT
GATAAATAGCATTGAGAAACATTCAATAGCTTTTCATCATCTCTAACACTGAACTTCTGCCTGAATATTTTCTCCAACCCTCCTACTTGAAGGAT
TTTTGCTCCAAGGCTCAATTTTCCCTTTAAAGTTTCTGTTAGTTTCGGGCTTACGCTCACATGCTCGCGGATGCTTTTTTACTAAACAATCCACC
CTTTTCTCCCATTTTGTTCATCTTACCAATGAACATATCTTCTCCTGGCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E554065] SGN-U573355 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T356578 [Download] [View] Facility Assigned ID: ctsc3b8
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0089 Quality Trim Threshold: 12.5