EST details — SGN-E554237

Search information 
Request: 554237Match: SGN-E554237
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C333013Clone name: cTSC-3-K20
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E554237Length: 819 bp (1232 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E554237 [] (trimmed) GGCGGAGCCTGAAGCAAAAGACGAGGATGAAAGTTCAATGTTGGCTACTATTAGGAGCAAATGCATCACACAGTTGTTACTTCTCAGTGCAATTG
ATAGTATTAATAAGAAATACTGGAACAAGTTAAAACCAACACACAAGATAACTATAATGGACATCTTGTTCTCTGTGTTAGAGTTTGCTGCATCA
TATAATTCGTATTCCAATCTGAGATTGCGGATGCGCCAAATACCTGCTGAAAGGCCACCATTTAATCTTCTCCGCCAGGAATTAGCAGGAACTTC
CATCTATCTTGATATCTTACAGAAGACGACAGCTGGGATCAATTCTGTAAGGGAAGAATCAACTGAAACTACCGTTGCTCAGAGTGGAAATAGTT
TCATAAATAATGATGCAACTTCTAGTGATAAGTTTCAAGAGCAGGGATCAATTAAAGAAGATAAGTTTCAACAAATTGCAGAAGAGAAACTGGTG
ACATTTTGTGGACAGGTTCTGAGGGAGGCATCTGAGTTCCAGTCCTGCACGACAGAGAGTGCTAATATGGATGTTCATCAAGTTCTGGAATTGCG
TTCTCCAATCATTGTTAAGGTGCTGAGGGGTATGTGCTCTATGAACAGCCAAATATTCAGGAGTCATCTTAGAGAGTTCTATCCTTTGATTACTA
AACTTGTGTGTTGTGACCAGATGGATGTACGTGGATCCCTTGCAGATCTTTTTAATATGCAGTTGAATCCGCTGTTGGCTTAAGATGTGTTGAGA
GTCAAGTGAGGCATGATTTTCTATAAAAAAGCTCAGGAGGCTGAATCGATAATTGACGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E554237] SGN-U567001 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T356784 [Download] [View] Facility Assigned ID: ctsc3k20
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5