EST details — SGN-E554275

Search information 
Request: 554275Match: SGN-E554275
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C333059Clone name: cTSC-3-M19
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E554275Length: 613 bp (1301 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E554275 [] (trimmed) GCTTCTCCATCAAGCCACACTAACTGAAGAAAAATCCCTACGATTCTTCTCATCGCCTTCAATCTCGATCCGGAAATGGGAAAAACCTATGCAGC
AGGGCATATTTGCAGCCCTAGCTTCTGCCAAATTTGGTACAGAAACGGTTTATGCTGATGGTAGTTTCAATTTCTCTCCGTTTTCCACTTCTTCT
TCTACTAATACCGCACCGAGTGCTCCTGCGAATCTTCCTAAGCCACCTCAGCCGACTGCGGAAGCTCCTGAAAAGCCAAAGGTTCGAAATGATAA
TCCCAGGACTACTTCAGCTGGTTTTGATCCGGAGGCATTGGAGAGAGGGGCTAAGGCATTGAGGGAGATTAATAATTCCAAAAGTGCCAAACAGG
TCTTTGATGTGATTAAAAAGCAAGAAGAGACAAGGCAAGCAGAGTTAACTGCAAAAATGCAAGAGTTTAAATCACTGCAAGCTCAAGCTGAGACG
GAAAGACAAAGGGTTGTATATGATGAACAAAAGAAACTAGCTTCATAACAGGCTCAAATCAAGTCACCAGATGGCTAGATATGAAGATGAATTAG
CAAGGATACGGATGCGTGCTGAAAATGAGCATCACAGAGCTAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E554275] SGN-U583854 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T356830 [Download] [View] Facility Assigned ID: ctsc3m19
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0108 Quality Trim Threshold: 14.5