EST details — SGN-E554387
| Search information |
| Request: 554387 | Match: SGN-E554387 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C333193 | Clone name: cTSC-4-C17 |
| ||
| Library Name: cTSC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E554387 | Length: 815 bp (1112 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E554387 [] (trimmed)
TTCGCACGAGGAGCCTTCAATATTCTTCTAGGGGATGATATGAGGGCTAAAGTTGCAGATTTTGGCCTCATCAGACTTGCTCCAAAAGGGAAAGG
TTCTATAGAGACAAGGATTGCTGGGACATTTGGATATCTGGCACCGGAATATGCAGTAACAGGGAGAGTGACAACCAAGGTGGACGTGTTCAGTT
TCGGTGTGATTTTGATGGAGCTCATCACAGGAAGAAAGGCTCTTGATGAAAGCCAGCCTGAGGAGAGCATGCATCTAGTAACATGGTTCCAAACA
ATGCATCTCAATAAGGATACATTCAGAAAGGCAATCGACCCTGCAATTAACCTTAGAGAGGAAACACTCGCCAGTATCAGCACTGTAGCTGAGCT
AGCTGGCCACTGCTCTGCAAGGGAGCCATATCAAAGGCCTGACATGGGCCATGCTGTCAATGTTCTTTCATCTCTTGTAGAGCTCTAGAAACCAT
CCGACGAGTGCTCATAGGACATATACGGCATTGATCTCGATATGTCATTACCCCAAGCGCTTAAAAAGTGGCAAGCTTATGAAGGTTCAAGTCAC
ATGAATTCATCCTCCTCTTCTTACCTTCCAAGCTTGGATAACACTCATACAAGCATACCTACTCGCCCCTACGGATTTGCTGAGTCATTTACATC
TTCTGATGGTAGGTGAGAAGTTGACACTCTTTGATCTAGGTTTGATTGTTCATTCTCTCCGTTTCTTCCTCATCGTGAGTCACACGACATTTTCT
TCTTCTTTTTGCTTTTAACTCTTTATGCATTTACCTTAACTCATTGTTATAGGGA
TTCTATAGAGACAAGGATTGCTGGGACATTTGGATATCTGGCACCGGAATATGCAGTAACAGGGAGAGTGACAACCAAGGTGGACGTGTTCAGTT
TCGGTGTGATTTTGATGGAGCTCATCACAGGAAGAAAGGCTCTTGATGAAAGCCAGCCTGAGGAGAGCATGCATCTAGTAACATGGTTCCAAACA
ATGCATCTCAATAAGGATACATTCAGAAAGGCAATCGACCCTGCAATTAACCTTAGAGAGGAAACACTCGCCAGTATCAGCACTGTAGCTGAGCT
AGCTGGCCACTGCTCTGCAAGGGAGCCATATCAAAGGCCTGACATGGGCCATGCTGTCAATGTTCTTTCATCTCTTGTAGAGCTCTAGAAACCAT
CCGACGAGTGCTCATAGGACATATACGGCATTGATCTCGATATGTCATTACCCCAAGCGCTTAAAAAGTGGCAAGCTTATGAAGGTTCAAGTCAC
ATGAATTCATCCTCCTCTTCTTACCTTCCAAGCTTGGATAACACTCATACAAGCATACCTACTCGCCCCTACGGATTTGCTGAGTCATTTACATC
TTCTGATGGTAGGTGAGAAGTTGACACTCTTTGATCTAGGTTTGATTGTTCATTCTCTCCGTTTCTTCCTCATCGTGAGTCACACGACATTTTCT
TCTTCTTTTTGCTTTTAACTCTTTATGCATTTACCTTAACTCATTGTTATAGGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E554387] | SGN-U569032 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T356964 [Download] [View] | Facility Assigned ID: ctsc4c17 |
| Submitter: Koni | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0167 | Quality Trim Threshold: 12.5 |
Working
