EST details — SGN-E554406
| Search information |
| Request: 554406 | Match: SGN-E554406 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C333216 | Clone name: cTSC-4-D16 |
| ||
| Library Name: cTSC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E554406 | Length: 845 bp (1223 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E554406 [] (trimmed)
GACGGATTTCAACTCAATAATGCAGGAGGTAAGAACAGTACGAGTGGGTAATGTATCAGATCTGGCAGCTGAGAGAGAGGTTCGCGAGTTCTTCT
CGTTTTCCGGCGAGATTGACCACATTGAGATTCGCCGAGAACAAGGACAATCCAAGACTGCCTTTGTTACATTTAAAGATCCGAAAGCGCTTGAA
ATTGCTTTGTTGTTGTCGGGAGCAACCATAGTGGATCAGATTGTAAGTATAAAGCAGGCAGAAGACTATGTTCCATCATCTGAGACTCGGGAAGT
CAGGATAGTTGATAATGCTGTGAATGTTGCTGGAGAAAGTTCTTCTCCGCTTGCTGAGGCCAAACCTACTTCTCCTAGCAATGGAAGGGTGAACG
GGAAAGTATATATCAGTAAAGCCCAAGATGTTGTCTCAAATGTGTTGGCGAAAGGTTCAGCTATCAGACAAGATGCAATGAATAAAGCCAAGGCA
TTTGATGAGAAACATCAGCTAAGAGCCACTGCATCTGCTCGAGTCATTTCCTTTGACCGAAGAGTTGGGCTAACAGAAAAGCTTACGGTTGGAAT
TTCTGTTGTAAATGAGAAAGTTAAATCTGTTGATCAAAGGCTTCAAGTGTCAGATAAAACGATGGCTGCAGTTATGGCAGCAGAACGGAAATTGA
ATGACACAGGATCAGCAGTCAAATCAAGCAGGTATGTTAATGCTGGAGCTGCCTGGCTGAATGGTGCTTTCAGTAAAGTAGCTAAGGCAGGGCAA
GTTGGCTGGTACAAAAACGAGAGAAAAATGGAATTTTGCGTTGTCAAATTTGACAGCAAAGGATCCTTCTATTGTTGCCTAGATC
CGTTTTCCGGCGAGATTGACCACATTGAGATTCGCCGAGAACAAGGACAATCCAAGACTGCCTTTGTTACATTTAAAGATCCGAAAGCGCTTGAA
ATTGCTTTGTTGTTGTCGGGAGCAACCATAGTGGATCAGATTGTAAGTATAAAGCAGGCAGAAGACTATGTTCCATCATCTGAGACTCGGGAAGT
CAGGATAGTTGATAATGCTGTGAATGTTGCTGGAGAAAGTTCTTCTCCGCTTGCTGAGGCCAAACCTACTTCTCCTAGCAATGGAAGGGTGAACG
GGAAAGTATATATCAGTAAAGCCCAAGATGTTGTCTCAAATGTGTTGGCGAAAGGTTCAGCTATCAGACAAGATGCAATGAATAAAGCCAAGGCA
TTTGATGAGAAACATCAGCTAAGAGCCACTGCATCTGCTCGAGTCATTTCCTTTGACCGAAGAGTTGGGCTAACAGAAAAGCTTACGGTTGGAAT
TTCTGTTGTAAATGAGAAAGTTAAATCTGTTGATCAAAGGCTTCAAGTGTCAGATAAAACGATGGCTGCAGTTATGGCAGCAGAACGGAAATTGA
ATGACACAGGATCAGCAGTCAAATCAAGCAGGTATGTTAATGCTGGAGCTGCCTGGCTGAATGGTGCTTTCAGTAAAGTAGCTAAGGCAGGGCAA
GTTGGCTGGTACAAAAACGAGAGAAAAATGGAATTTTGCGTTGTCAAATTTGACAGCAAAGGATCCTTCTATTGTTGCCTAGATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E554406] | SGN-U570724 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T356987 [Download] [View] | Facility Assigned ID: ctsc4d16 |
| Submitter: Koni | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |
Working
