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EST details — SGN-E554519

Search information 
Request: 554519Match: SGN-E554519
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C333352Clone name: cTSC-4-I9
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E554519Length: 903 bp (1168 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E554519 [] (trimmed) GATCCTAAGTTATCAGTGTTTGGTACAATCAGTAGGCAAAAAAGTGAGCTTGTGATTTACAAGATCATATCCAATAAGAAAATTCATCTGTGCCA
AGTTTCCATAAATACCATATAGATCCCCCTTCACAATTGTCAAACAAGTCAACTCTTCATCAACTTTTGAAAATGCATTCATAGGTAACGTCTCG
ACATCAGCATTCGTGAAATGGAACACAATGTTAGGGAATTCGACAACGCTCTTCGTCTCATAACATATGGGTAGGTCCACACCCGGGGGAGCTAT
TTTCCTCGATCCTTTAATCGTTTCCACCAAAATTGATTCAAATCTGTCGTAAAAATTCTCAGGGAGATATGTCAATGTCGTCCCAGAATCAATTA
TAATATTTCCCAAATCTTCATCAGCAACATCGGAAGAACTCATGAGTTGTGAAGACTTAAACTCTAACTTCTTACCTCCAACGCTAATACTTTCG
AGATTTAAAAAGTAGAATAGATCGTAGCCTAATACAACAGACTTCTTTCGAATTATAGGAGTTGTAAGAACGTTAGTCCCCGATACAAATGCCTT
AGGACCAAAATTAATTTTACTAGTAGTATTAGGAGAATGATAAGGTAGTGATAAATCACCATTTGGGACTAAACAATATGAGAATTTCCCTTTAA
TTTGTTTATCAAGTTGATTAATAATCGAGATATTTGAATATCCTAATCCCACAATCCCAGCACTATGATTGCCAAAATTGCCACCATTATGATGT
CCACAACCAAAAATAACATTTTCAATTGAAATATCATTGACCTTTTTAGAATAAGTTGAATCAAATGTGAATGTGTCAGAAAGCACATCACCAAT
ACTATAAGAACCATCACCCTAATGCACTTCAAATTCACAAACATTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E554519] SGN-U572038 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T357123 [Download] [View] Facility Assigned ID: ctsc4i9
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5