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EST details — SGN-E554631

Search information 
Request: 554631Match: SGN-E554631
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C333486Clone name: cTSC-4-O22
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E554631Length: 820 bp (1160 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E554631 [] (trimmed) GAGCTCCACTTGTGGTTAAACCATCCAATGTCAAAGAGCTTGCTGAATCTCCTGATTTGCGTTGCATACCTTACAATTATGTTTATGACTCTTCC
AATTCCTCTGCTACAAATGATATTGATGATTCAGATTCAATCCCCATTGTTGATTTTTCTCTACTCACCTCTCATGATTCTCATCAACGTTCTAC
AGCCATCCACCACCTCACCAAAGCTTGTCAAGGTTGGGGCTTCTTCATGGTAGTGAACCACGGCATACCAGAAAATCTGATGAAGTCAGTGATTG
ATTGCACTCATGAATTTTTCAATTTACCAGAGGAAGAAAAACACAAGTTTACTGGGAAGCATGTGTTGGATCCTATAAGATATGGGACAAGTTTC
AATACTAGTACAGAAAATGTCTTCTTTTGGAGAGATTTTCTCAAGGTCTTTGTCCATCCTCATTTTCACTCTCCCACCAAACCACAAACCTACAG
GGGTATTATGTCGGAGTATAGTGAGAAACTCCGGGAAGTGACAAGAAAGTTACTAGGAGGCATATCTGAAAGTTTAGGGCTTGAAGAAAGTTACT
TGGAGAAAGATTTAGAGTTGGAATCAGGGCTTCAAATCTTCGTTGGAAATTACTATCCACCTTGTCCTCAACCTGAACTAGCAATGGGTATGCCA
CCTCATTCAGATCAAGGCCTTTTAACACTTCTCATTCATAACCAAGTTGGAGGTCTCCAGGTTCAACATCAAAGCAAATGGATTAACGTCAAGGC
CCTTCCTAACTACTCTCTCTTGGTTAATACCGGCGATCATCTCGAGATATTTAGTAATGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E554631] SGN-U579869 Tomato 200607 Build 2 86 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T357257 [Download] [View] Facility Assigned ID: ctsc4o22
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0039 Quality Trim Threshold: 14.5