EST details — SGN-E554852

Search information 
Request: 554852Match: SGN-E554852
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C333751Clone name: cTSC-5-J8
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E554852Length: 867 bp (1366 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E554852 [] (trimmed) GCAGCTGCACTTTTGGGAGACAATGTACTTATGGAGAAAGCATGGCAGGAAACTGGGATGCTTGCTGAGGCTGTACTACATGCACATGCTCATGG
CCGACCTTCAATGAGAACCTTGGTCCAGTCATGGAACAAAATGTTGCAGAAGGAGTTGGAACACACTCCATCAATGAAAACTGATGCCGCGGCTG
CATTTCTGGCCTCCCTCGAGGGGTCTAAGCTCACAAGTTTGGCAGATGCTGCGAAGAAGCCACCAATTGAAATACTGCCACCTGGTATGGCATCT
CTATACGGTCCAAATCCCGGTCAAGCCAAACCTCTTTTGGGGAAGCCGGGGTTGCCACAACCTGGCAAACCACTACTTCTGGAAGGATCTAAAAC
AACAGCACCAATTGCTTCTGTTCCTGCTGGAAGCAACACACCTGCAACATCAGAATCAGGTGTTCCTCTTAAATCAGAAAACGGGGCTTCCACTA
CACCAGAATCAAGTAATCCACCTGCGTCAGACTCTGGTGCTGCACCGGCATCAGACTCTGGTGCTGCACCCGCATCAGACTCTGGTGCTGCACCC
GCATCAGAAACTGGCGCTGCACCCACGACAGAAACTGGCGCTGCACCACCGGCGACAGAAATTGGTGCTACACCACCCGTGATAGAATCTGGTGC
TGCATCCGCAACAGAAACCGGTGCCACTCCTGCAGAATCAAGTACAACCCAAACATCAAACTTGGATTCTTCAGTTGCTGCTGATGCAGTTGTGC
CTGCTACACCAGCATTGAATGAATCAGACTATCTAGCGTTGGTCCCATCAACATCAGCTCCTGCAGAACCAACTACAATTGGCGCATTTGTTCCA
TCCACCAGGTCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E554852] SGN-U573888 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T357522 [Download] [View] Facility Assigned ID: ctsc5j8
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0027 Quality Trim Threshold: 14.5