EST details — SGN-E555023
| Search information |
| Request: 555023 | Match: SGN-E555023 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C333956 | Clone name: cTSC-6-C5 |
| ||
| Library Name: cTSC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E555023 | Length: 830 bp (1302 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E555023 [] (trimmed)
TTTTTTTGGTTGCACACAACATGAAATAATTTAATGGACTGAATCATCTACTAGACGATCCTTTAATTAGGTTCAAACAATTGGATACGAGATGG
AAGTCAGCAATAACACAAGTACGAACAACGAAATCAGGATGAAAAGGAAAAGGAAAAAAATCGTTGCAGGTGAAACAGCAGCCTAAATGGAATCC
AAAGCCTGAAGAACATCAGCTTTCACATCTTCAAAATCTTCCACTCCAGCTAAATCGGACCAAGTTATCCAAGATGCCATACTTTGCTCTATCAG
ACTGGCTAAGATCCCAATAAGACATTATTGCTGGTTGGTCCACAATGCTCTCACAACCTCCAAACGATGGAGCAATATAAGGAATCCTCAGAGCA
TCCACAAATTTTGCAGTAGTTAGGAGGTCTCCATCAACCTCAAAACTGACCACACCACCAAAGCCAGTCATTTGTTTCTTTGCAAGGTGATATTC
CGGATGACTCGGCAAGCCTGGATAATAGACGTGTTTCACCTTGGGATGAGCCTCTAAAATTTCGGCCATCCTCAATGCAGTAGAATTTTGTTGCT
GTACACGAAGATGCAGCGTCTTCATGCCTCGGATGATAAGATATGCAGCATTAGGATTGAGAGCACCACCCAGGATATGATGCAAGTTTCGGATT
ACTGAAACTAATTTTTCAGGACCACTAATACAACCTGCAAGAACATCGTTGTGCCCACCAAGGAATTTTGTAGCAGAGTGCACAACAAGGTCAGC
CCCTAGAGCAAGGGCCTTCTGGTTAAGAGGAGTTGCAAATGTTCCATCTATGCAAACCAAGGCTCCTTTT
AAGTCAGCAATAACACAAGTACGAACAACGAAATCAGGATGAAAAGGAAAAGGAAAAAAATCGTTGCAGGTGAAACAGCAGCCTAAATGGAATCC
AAAGCCTGAAGAACATCAGCTTTCACATCTTCAAAATCTTCCACTCCAGCTAAATCGGACCAAGTTATCCAAGATGCCATACTTTGCTCTATCAG
ACTGGCTAAGATCCCAATAAGACATTATTGCTGGTTGGTCCACAATGCTCTCACAACCTCCAAACGATGGAGCAATATAAGGAATCCTCAGAGCA
TCCACAAATTTTGCAGTAGTTAGGAGGTCTCCATCAACCTCAAAACTGACCACACCACCAAAGCCAGTCATTTGTTTCTTTGCAAGGTGATATTC
CGGATGACTCGGCAAGCCTGGATAATAGACGTGTTTCACCTTGGGATGAGCCTCTAAAATTTCGGCCATCCTCAATGCAGTAGAATTTTGTTGCT
GTACACGAAGATGCAGCGTCTTCATGCCTCGGATGATAAGATATGCAGCATTAGGATTGAGAGCACCACCCAGGATATGATGCAAGTTTCGGATT
ACTGAAACTAATTTTTCAGGACCACTAATACAACCTGCAAGAACATCGTTGTGCCCACCAAGGAATTTTGTAGCAGAGTGCACAACAAGGTCAGC
CCCTAGAGCAAGGGCCTTCTGGTTAAGAGGAGTTGCAAATGTTCCATCTATGCAAACCAAGGCTCCTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E555023] | SGN-U578164 | Tomato 200607 | Build 2 | 105 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T357727 [Download] [View] | Facility Assigned ID: ctsc6c5 |
| Submitter: Koni | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0104 | Quality Trim Threshold: 12.5 |
Working
