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EST details — SGN-E555036

Search information 
Request: 555036Match: SGN-E555036
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C333972Clone name: cTSC-6-D2
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E555036Length: 514 bp (1288 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E555036 [] (trimmed) GGAGAAAGTCGATTGGTGCTGCTGCTTACATTGAATGTAGTGCAAAAACTCAACAGAACATTAAGGCTGTTTTTGATGCGGCCATTAAGGTGGTC
CTACAACCACCCAAGCAAAAGAAGAAGAAGAAGAGAAAGGGTCAGAAAGCCTGCTCTATCTTGTGATTGCTAAAAGCATTAGCTGAAGGAAGGAG
ATGTAGATTGTTTATCAACGTCTTCCAAGTTCAAAAAATGCACAACATAAGGTTCAGTACTGTTAGTCTTGACTGACTATAACTGGAAAGCATCA
AACCTGCAGTTGTCCGTTTGATTATAGGCCGAGATGTATATTTGTGATCCGAAGTATGGTTTAGGGGTGTACGAATGTGCAAAAATCATCTCAGT
TCGTTTTAAATATGTATAATCTATTATGTAACACTAGTATGATGATTTTTCGTCTTTGCGTCTGCTAAATGTTGTTGTGTAATGTGCCTGAACAT
ACTGATTTAGATTGTCCAACAAGTTGATTTGCTATTGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E555036] SGN-U578524 Tomato 200607 Build 2 40 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T357743 [Download] [View] Facility Assigned ID: ctsc6d2
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0184 Quality Trim Threshold: 14.5