EST details — SGN-E555145
Search information |
Request: 555145 | Match: SGN-E555145 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C334103 | Clone name: cTSC-6-I8 |
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Library Name: cTSC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E555145 | Length: 847 bp (1292 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E555145 [] (trimmed)
GCATGGGAAGACATTAGGCACTTCAACAACTGTTTCACGCAATGCAGATGGATTGCTTGTTCCTAGAGCAGTTTGGAAGTGCCTAATGTATCATG
GGAAGACATTGGAGGCCTTGAAAATGTCAAAAGAGAGCTTCAAGAGACTGTTCAATACCCCGTGGAGCATCCAGAGAAGTTCGAGAAATTTGGTA
TGTCACCTTCAAAAGGTGTTCTTTTCTATGGTCCTCCGGGATGTGGGAAAACTCTTCTTGCCAAGGCAATTGCAAATGAGTGTCAAGCCAATTTC
ATTAGTGTCAAAGGACCTGAGCTGCTTACCATGTGGTTTGGAGAGAGTGAGGCCAATGTCCGTGAAATTTTTGACAAGGCTAGACAATCTGCACC
CTGTGTCCTCTTCTTTGATGAGCTTGACTCTATTGCCACTCAGAGGGGAAGCAGTAGTGGTGATGCTGGTGGAGCAGCTGATCGGGTTCTCAACC
AACTTCTGACTGAAATGGATGGCATGAATGCAAAGAAAACTGTTTTTATTATTGGGGCCACAAACAGGCCTGATATTATTGACCCTGCACTTCTG
CGACCCGGTCGACTTGACCAGTTAATTTATATCCCACTGCCAGACGAAGACTCGCGCCATCAGATTTTCAAGGCATGTCTTAGAAAATCTCCCCT
ATCAAAAGATATTGATTTGAGAGCTCTTGCCAAATATACTCAGGGATTTAGTGGAGCCGATATCACTGAGATCTGTCAACGGGCCTGCAAATATG
CCATAAGGGAGAATATTGAGAAAGATATAGAAAAGGAAAAGAGGCGAGCAGAGAATCCTGATTCTATGGATGAGGATGCTGATGATG
GGAAGACATTGGAGGCCTTGAAAATGTCAAAAGAGAGCTTCAAGAGACTGTTCAATACCCCGTGGAGCATCCAGAGAAGTTCGAGAAATTTGGTA
TGTCACCTTCAAAAGGTGTTCTTTTCTATGGTCCTCCGGGATGTGGGAAAACTCTTCTTGCCAAGGCAATTGCAAATGAGTGTCAAGCCAATTTC
ATTAGTGTCAAAGGACCTGAGCTGCTTACCATGTGGTTTGGAGAGAGTGAGGCCAATGTCCGTGAAATTTTTGACAAGGCTAGACAATCTGCACC
CTGTGTCCTCTTCTTTGATGAGCTTGACTCTATTGCCACTCAGAGGGGAAGCAGTAGTGGTGATGCTGGTGGAGCAGCTGATCGGGTTCTCAACC
AACTTCTGACTGAAATGGATGGCATGAATGCAAAGAAAACTGTTTTTATTATTGGGGCCACAAACAGGCCTGATATTATTGACCCTGCACTTCTG
CGACCCGGTCGACTTGACCAGTTAATTTATATCCCACTGCCAGACGAAGACTCGCGCCATCAGATTTTCAAGGCATGTCTTAGAAAATCTCCCCT
ATCAAAAGATATTGATTTGAGAGCTCTTGCCAAATATACTCAGGGATTTAGTGGAGCCGATATCACTGAGATCTGTCAACGGGCCTGCAAATATG
CCATAAGGGAGAATATTGAGAAAGATATAGAAAAGGAAAAGAGGCGAGCAGAGAATCCTGATTCTATGGATGAGGATGCTGATGATG
Unigenes |
Current Unigene builds | |||||
[SGN-E555145] | SGN-U578906 | Tomato 200607 | Build 2 | 59 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T357874 [Download] [View] | Facility Assigned ID: ctsc6i8 |
Submitter: Koni | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.974 | Expected Error Rate: 0.0018 | Quality Trim Threshold: 14.5 |