EST details — SGN-E555596

Search information 
Request: 555596Match: SGN-E555596
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C333879Clone name: cTSC-5-P17
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E555596Length: 799 bp (1273 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E555596 [] (trimmed) CATTCAAATGGGTGCTCTTCCAATTTATTGCATTCATTGTTCTGTGTGGGATGACTCATTTGCTCAATTTCTGGACTTACTATGGCCAACACCCG
TTTCAGCTTATGCTTGCTTTAACCATTTTTAAAGTCCTCACTGCACTGGTATCCTTCGCCACGGCTATAACCCTTATTACCCTCTTTCCTATGCT
GCTTAAAGTCAAGGTGAGGGAATTTATGCTGAAAAAGAAGACTTGGGATCTTGGTAGAGAAGTTGGATTAATAAAGATGCAAAAAGAAGCTGGAT
GGCATGTTCGGATGCTTACACAGGAGATTCGAAAGTCACTTGACCGTCATACAATACTCTACACAACTCTGGTGGAGCTATCAAAGACGCTGGAT
TTGCATAACTGTGCTGTTTGGAAGCCCAATGAGAATAAAACTGAGATGAACCTAATTCATGAGCTGAGAGACAGTAGCTTTAATAGCGCGTATAA
TTTACCTATCCCGAGAAGTGATCCAGATGTTATACAGGTTAAGGAGAGTGACGGAGTAAAGATACTTGATGCCGACTCCCCACTTGCTGTTGCGA
GTAGTGGAGGGAGTAGGGAACCAGGAGCTGTGGCTGCAATTAGGATGCCGATGCTTAAAGTGTCGAACTTCAAAGGTGGAACTCCTGAACTTGTC
CCAGAATGTTATGCCATACTGGTTTTGGTTCTACCTAGTGAACAAAGTAGATCATGGTGCAGCCAGGAAATTGAGATAGCCAGGGTTGTGGCTGA
TCAGGTTGCTGTGGCTCTTGTCCCATGCTGCAATTCTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E555596] SGN-U581695 Tomato 200607 Build 2 44 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T357650 [Download] [View] Facility Assigned ID: ctsc5p17
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5