EST details — SGN-E555690
| Search information |
| Request: 555690 | Match: SGN-E555690 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C328665 | Clone name: cTSD-1-B23 |
| ||
| Library Name: cTSD | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E555690 | Length: 872 bp (1254 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E555690 [] (trimmed)
GCTCAGCTGTGCCGCATATCGCCTAATTTTTCTTCTCTAAGTTTCTTAGTGTCTCAAGATGGGTAAAGAGAAGATTCACATCAGCATCGTGGTCA
TTGGTCATGTTGACTCTGGAAAGTCGACTACCACTGGTCACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTTATTGAGAGGTTCGAGAAG
GAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTTGACAAACTTAAGGCAGAACGTGAGCGTGGTATCACCATTGATATTGC
TTTGTGGAAGTTTGAGACCACTAAGTACTACTGCACTGTTATTGATGCCCCCGGCCACAGGGATTTCATCAAGAACATGATCACTGGTACCTCTC
AGGCTGACTGTGCTGTTCTCATTATTGACTCCACTACTGGTGGTTTTGAAGCTGGTATCTCCAAAGATGGTCAGACCCGTGAACATGCATTGCTT
GCTTTCACCCTTGGTGTCAAGCAAATGATCTGCTGCTGTAACAAGATGGATGCTACCACCCCCAAGTACTCCAAGGCTAGGTATGATGAAATCGT
GAAGGAAGTTTCTTCCTACCTCAAGAAGGTTGGTTACAACCCTGACAAAATCCCCTTTGTTCCAATCTCTGGTTTTGAAGGAGACAACATGATTG
AGAGGTCTACCAACCTCGACTGGTACAAGGGACCAACCCTCCTTGAGGCTCTTGACCAGATTAATGAGCCCAAGAGGCCATCAGACAAGCCCCTC
CGTCTTCCACTTCAGGACGTTTACAAGATTGGTGGAATTGGAACTGTCCCCGTTGGTCGTGTTTGAACTGGTGTGATCAAGCCTGGTATGGTTGT
GACCTTTGGCCCTACTG
TTGGTCATGTTGACTCTGGAAAGTCGACTACCACTGGTCACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTTATTGAGAGGTTCGAGAAG
GAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTTGACAAACTTAAGGCAGAACGTGAGCGTGGTATCACCATTGATATTGC
TTTGTGGAAGTTTGAGACCACTAAGTACTACTGCACTGTTATTGATGCCCCCGGCCACAGGGATTTCATCAAGAACATGATCACTGGTACCTCTC
AGGCTGACTGTGCTGTTCTCATTATTGACTCCACTACTGGTGGTTTTGAAGCTGGTATCTCCAAAGATGGTCAGACCCGTGAACATGCATTGCTT
GCTTTCACCCTTGGTGTCAAGCAAATGATCTGCTGCTGTAACAAGATGGATGCTACCACCCCCAAGTACTCCAAGGCTAGGTATGATGAAATCGT
GAAGGAAGTTTCTTCCTACCTCAAGAAGGTTGGTTACAACCCTGACAAAATCCCCTTTGTTCCAATCTCTGGTTTTGAAGGAGACAACATGATTG
AGAGGTCTACCAACCTCGACTGGTACAAGGGACCAACCCTCCTTGAGGCTCTTGACCAGATTAATGAGCCCAAGAGGCCATCAGACAAGCCCCTC
CGTCTTCCACTTCAGGACGTTTACAAGATTGGTGGAATTGGAACTGTCCCCGTTGGTCGTGTTTGAACTGGTGTGATCAAGCCTGGTATGGTTGT
GACCTTTGGCCCTACTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E555690] | SGN-U580418 | Tomato 200607 | Build 2 | 320 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T352436 [Download] [View] | Facility Assigned ID: ctsd1b23 |
| Submitter: Koni | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0030 | Quality Trim Threshold: 14.5 |
Working
