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EST details — SGN-E555859

Search information 
Request: 555859Match: SGN-E555859
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C328868Clone name: cTSD-1-K12
nocartOrdering Not Available
Library Name: cTSDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E555859Length: 823 bp (1307 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E555859 [] (trimmed) GGTGGCATCGAATACCTGCACTCTCAAGGTCCTGATGTCTCCCATGGGAATATCAAGTCATCCAATGTTCTTCTCACCAAATCATACGAAGCACG
TGTCTCAGATTTTGGCCTGGCTAACTTGGTTGGACCGCCATCCTCCCCTACTCGAGTTGTTGGATATCGTGCTCCAGAGGTAACTGATCCTCGCA
AGGTTTCCCAAAAGGCTGATGTCTATAGCTTTGGAGTATTACTTTTGGAGCTTCTTACTGGAAAAGCACCTAGTCATGCCCTCTTGAATGAAGAA
GGTGTTGATTTGCCAAGATGGGTTCAATCTGTCGTTCGTGAAGAATGGCCTTCTGAAGTTTTTGATATTGAGCTCCTCAGGTACCAGACTGCTGA
AGAACAGATGGTCCAACTCTTGCAGCTAGCAATGAATTGTACAGTTCAATATCCCAATAACCGACCTTCAATGGCTGAGATCTCTAAACAGATTG
AAGAGCTTCAACGTCCAACCTCACACTGATAAACAAGAACTCTCTGATCTTGCCAATTCAACAGAGTAAACTGGCCATATTAGTCCCTCAAGATG
TGCAGTAATTAAGCTAAACTCAGATTCATCACCAATATACTGAGCCAATTCTTAAGCATATTGTTGAACTTGTTGTTTGTTGGGGGAGGGGTGTC
TAATCGTTCGTCTTTCAGTTTGAATAACTGATCATGGCCCCTTTTCCTCTATGTTTCTGTAGTAGACTAGTGGTTACCCCTTTCATTTTCCTTTA
GATGAGGGGCCAAAGCCAATATCTGTACCATTTATTCCTGTTGGATGTATAATGCTTTCCGTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E555859] SGN-U584711 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T352639 [Download] [View] Facility Assigned ID: ctsd1k12
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0004 Quality Trim Threshold: 14.5