EST details — SGN-E555972

Search information 
Request: 555972Match: SGN-E555972
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C329004Clone name: cTSD-1-P9
nocartOrdering Not Available
Library Name: cTSDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E555972Length: 588 bp (1307 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E555972 [] (trimmed) GTAACAGTCTAGGTTCAACAAAGCTCTAAATAGGAACCTTACAACTTTATCAGCCGAGGTACAAGACAAGATAAGACATCCCAGACAACCAAATA
AGAGAAAGAAACTGATCCAACCCCCAAACGATAGAGAGCATTACATTCATCCAAAGGTACAGCGTAACAGGATAAATTTGTAAAAAGAAACCATT
ATCCCAAAGCTGACCAAGTCTGATGAAGGTTTGGTCTTTTTTCTTAAAAAAACAACTTCAAAAGAGGGAAATCACTTGGCCATCATGACCTTAAC
AAACTCATCGTAGTTAATTTGTCCATCGCCATCGACATCAGCCTCTCTGATCATTTCATCAACTTCTTCATCAGGGAGCTTCTCACCAAGGTTAG
TCATCACATGACGGAGCTCAGCAGCAAAGATGAACCCATTCGGGTCCTTGTCAAACACTCTGAAGGCCTCCTTTAGCTCCCCCTCGGAGTCTGTA
TCCTTCATCTTCCGGGCCATGAGGTTCAAAAACTCGGGGAAGTCGATGGTTCCATTACCATCAGCATCCACTTCATTTATCAGGTCCGGGAGCTC
AGCTTCAGTTGGGTTCGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E555972] SGN-U578282 Tomato 200607 Build 2 85 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T352775 [Download] [View] Facility Assigned ID: ctsd1p9
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0095 Quality Trim Threshold: 14.5