EST details — SGN-E556333

Search information 
Request: 556333Match: SGN-E556333
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C329437Clone name: cTSD-3-C20
nocartOrdering Not Available
Library Name: cTSDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E556333Length: 566 bp (1334 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E556333 [] (trimmed) GCACAGATGGTAACTTCTTGACTTTTATATCGCAAAATCAAGTCAATGGATTGCAAATCAACAAAAATGGAGAATGGATTGATGTGAATATTTCA
CCAAATTCTTATGTTGTTTTGGCTGGTGATTCCTTCAAAGCTTGGACAAATGGTCGATTGCATTCTCCTCTTCACAGAGTAACAATGTCCGGAGA
AAATGATAGACTCTCCATTCAATTATTTTCATTATCAAAACCAGGTCACTTCATCGAGGCACCAAAAGAACTAGTGGATGAAGAACACCCTTTAC
TCTTCAAGCCATTTGAAATTATTGGATTATTTGAGTATGGTACCACAGAAGCTGGCTATACAGCTCCTCCAAGTGATCTTCTCAAGAGTTATTGC
GGTGTTTGATATGCTAATTGCGAATTTCCGCTTCAGCAACCAACTTTTCTAATAAGTTTCGTGTGAAATTCGTGTTGTTTTAATTATTATGCATT
TTATGTTTGAATTGTTGTAGTTGGCAATTCATGTTTAATTTGTTTGTGTTTTTTTTTTTTTTTGAGAAAATATTGCATTGGGTTTCATTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E556333] SGN-U580211 Tomato 200607 Build 2 38 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T353208 [Download] [View] Facility Assigned ID: ctsd3c20
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.916 Expected Error Rate: 0.0002 Quality Trim Threshold: 14.5