EST details — SGN-E556340
Search information |
Request: 556340 | Match: SGN-E556340 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C329446 | Clone name: cTSD-3-C7 |
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Library Name: cTSD | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E556340 | Length: 273 bp (1265 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E556340 [] (trimmed)
GATTCAGTGTCACTGGTGCAATGCTGACTAAAAAGAAGGTGGAAGAGGATGATAGTAATAATGACATTGTGATGGTTGATGGAAAGTTAGATCTT
AACAAGAAAAAGAGGGTGCAATAACTTTTTCTTACATCTTAATTTTAGCTGTGCATCTGTCTAACTTTGTACAATATAGGGAGAAACATTGATTC
TTTGCCCACTTCCTAACTTATGAGTTGTTCGTTAGGTGCAAACTTTATAAATTTTTGATACTGGCATGATCCAGTTCTAATTT
AACAAGAAAAAGAGGGTGCAATAACTTTTTCTTACATCTTAATTTTAGCTGTGCATCTGTCTAACTTTGTACAATATAGGGAGAAACATTGATTC
TTTGCCCACTTCCTAACTTATGAGTTGTTCGTTAGGTGCAAACTTTATAAATTTTTGATACTGGCATGATCCAGTTCTAATTT
Unigenes |
Current Unigene builds | |||||
[SGN-E556340] | SGN-U571216 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T353217 [Download] [View] | Facility Assigned ID: ctsd3c7 |
Submitter: Koni | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.918 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |