Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E558474

Search information 
Request: 558474Match: SGN-E558474
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C336035Clone name: 17820
nocartOrdering Not Available
Library Name: SWSTOrganism: Solanum tuberosum

Tissue: Stolon
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E558474Length: 678 bp (743 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E558474 [] (trimmed) TTTCATATCTTTCTCTTCCATTTTCAGTTTCTCCGATCCCGGGTTGGAGTTTCCCTTCATCATTTTCTGAGAAATAATTTCTAATGGCCGCTCCA
CCCGCTAGAGCTCGAGCTGATTACGATTACCTCATCAAACTCCTTTTGATCGGCGACAGCGGTGTGGGTAAGAGTTGCCTTCTTTTACGTTTCTC
AGATGGCTCCTTTACGACCAGTTTTATCACAACTATTGGTATTGACTTCAAGATAAGGACCATAGAGCTTGACAGTAAACGAATCAAACTGCAAA
TCTGGGATACCGCTGGTCAGGAGCGGTTCCGAACAATTACAACTGCTTACTACCGTGGAGCCATGGGTATATTGCTGGTGTACGATGTAACTGAT
GAGTCATCTTTTAACAACATTAGGAACTGGATAAGAAACATTGAACAGCATGCTTCCGACAATGTCAACAAAATTCTGGTCGGCAACAAGGCTGA
CATGGATGAAAGCAAAAGGGCTGTTCCTACATCCAAGGGTCAAGCACTTGCTGATGAATATGGCATTAAATTCTTCGAAACTAGTGCCAAGACAA
ATATGAATGTTGAGGAGGTTTTCTTTTCCATAGCTCGGGATATAAAACAAAGGCTTGCCGAATCTGACTCAAAGGCTGAGCCTCAGACCATCAGG
ATAAATCAACCGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E558474] SGN-U270690 Solanum tuberosum Build 4 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T359919 [Download][View] Facility Assigned ID: bf_swstxxxx_0020h01.t3m
Submitter: Rebecca Griffiths Sequencing Facility: GASF
Funding Organization: Genome Atlantic
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.988 Expected Error Rate: 0.0006 Quality Trim Threshold: 14.5