Notice: SGN will be briefly unavailable for maintenance. Apologies.

EST details — SGN-E571979

Search information 
Request: 571979Match: SGN-E571979
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C349122Clone name: 31060
nocartOrdering Not Available
Library Name: IVROOTOrganism: Solanum tuberosum

Tissue: Root
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E571979Length: 627 bp (1006 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E571979 [] (trimmed) CAATATTAGTTCAGCAGCGAGAGATACTAGATCAAGCAAAGCTAGATCGACAGAAGCAGGCCACTCTAGTGGAACATCCAGTAGTAGACCTCGTA
AAATAGTTTGTCACAAGTCTGGTTCTTACAATCAACGTACTCCAATGCATGCCTCTGTTTCTTCACAATCTAAAGCCATTGATTCTGAAAAGCGG
CCCTGTAGCAGTGGGGCTGGATATGGGTTGAGAAATCTAAAATGTAAGTCCATATCAGATGTCCTCCCAAATAATTGCTCAATGTCGGAATCAAG
ATTTAGTAGAAGGGACATGGTAAAAAGGAGAAATACCGAAGGTGAAAGCAGTTCATCTGCTAAAGGGAAGAAAAATACCAAGGCATCACAGAGAG
AAAAGCATGTCACTCGTCAAACACGTGGAATCTCCATCTCTGAGTCAAGAAGTGGCAGACATTTGGATTATAGTGTGAATAATCATGCTTTGTCC
AGTTCAGACCCGCAGGTCAATGAATGTGAATTCTAGGTTTAGGGGTCCAGTACAAGATTCATTGCAAACTGAGTCCTCTGGCTTAGTCCAAAGTT
TACATCGGCCTGAAACGCCAGATCTCAATCTGGAGTCTTCAAGCCAAATTGTTCCAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E571979] SGN-U278370 Solanum tuberosum Build 4 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T372893 [Download][View] Facility Assigned ID: bf_ivrootxx_0004c10.t3m
Submitter: Rebecca Griffiths Sequencing Facility: GASF
Funding Organization: Genome Atlantic
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0040 Quality Trim Threshold: 14.5