Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E572301

Search information 
Request: 572301Match: SGN-E572301
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C349487Clone name: 31433
nocartOrdering Not Available
Library Name: IVROOTOrganism: Solanum tuberosum

Tissue: Root
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E572301Length: 794 bp (895 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E572301 [] (trimmed) TTTTTTTTTTTTTTACAGATGAAGATGCTAGAATTTAATTGAATCTCCTGTATAGAAACAAGTATCTGGGAAGATATTAGATAGGCTAATCTCTT
CTTAAGCTAAAACAAATAGTTAAACAGTACACCACATGAAGAATAGATCTTTCCTAAATCACTAGGACAATTAACATTCACAAGCCCTTTCTCTT
GTATAATCAAGAAAGTAATCTACATCTCTTGCTCTGAATAATGTAAAATAAACCAAAAAATTTAAATATACCGAACCTCGTTTCCTCGTTGAAAC
CTTTTAACTCAGGTAGAACAGCAGCCTCTCTTCACATTTTCGGAGGTGTCATTAACATTGATGGTTGTACCCTGACCGGGAAGAGTAGTGGTTGT
GGCTGCTGTTTGTGCAGCCAGCGCCTTCTTGCTTATGATATGGTATATCTCGGTCAGTATAGTCTGAAAAGCCTTATCTACGTTAACTGCTTCCA
ATGCCGATGTCTCGAGAAATGACAATCCTTCCTTCTCAGCTAAATTTTGACCATCCTGCTCAGAGACTGCTCGAAGGTGGCTAAGGTCCGACTTG
TTTCCAGCCATCATAATGACAATGTTAGAATCTGCATGGTCTCTCAATTCTCGGAGCCACCTTTGAACATTGTCGAATGTTTGTCCCTTTGTTAT
GTCCATAAACAAAGAGTGCACCAACTNGTCTCTGTAATAAGCACTGGTAATGGCTCGGTACCGTTCTTGGCCTGCAGTGTCCCATATTTGGGGCT
AGACCGTCTTTCCCTTCACCTGAAGAGTTCTGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E572301] SGN-U277256 Solanum tuberosum Build 4 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T373258 [Download][View] Facility Assigned ID: bf_ivrootxx_0008b11.t3m
Submitter: Rebecca Griffiths Sequencing Facility: GASF
Funding Organization: Genome Atlantic
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0106 Quality Trim Threshold: 14.5