EST details — SGN-E572867
Search information |
Request: 572867 | Match: SGN-E572867 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C350128 | Clone name: 32088 |
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Library Name: IVROOT | Organism: Solanum tuberosum |
Tissue: Root
Development Stage:
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E572867 | Length: 786 bp (1089 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E572867 [] (trimmed)
AATTACACAAACATAGCATAAGAAATTGAAAATATTCCTCAATTCACAATTAATCAAACAATCAATTACAAGGCAGGATAAAATGTGTTCATAGT
TTCATACATATAGCGCGATTCAGAATCTTTTTGAAACAAATATACCCTATTTTGGAGGTCCATAAGCAGCCAGCTAATACAATAAATCATTGACC
AATGGAAGCAAAATACAGAAACAAGGATAAAGAATGCTATGAATAAAGCTAATTTGGATATTCAATCTTGGGGCTGCACTCAATTCAACAATGTC
TAGTTGTCCAGTGAATAAAGCTATTAGTGCTAAGCAATTCATGTGGTTAGAGGTTGAAGTACAAATGTCATGTGAAATTCAGCTCAAAACAAAAA
GAATCTCGTCCGCGGTTTAGATTACTCTTTGTTCTAAGCAGAACAGCACCCAGCTTTCTTTACTTCAGAAACATCATCCTTACCTCCTACATTAA
TCGTCTGCCCCTTGGGAAGTGTTGCCGGGTCATCTCCTACTTCAAGAGCTTTCCTGCTAACAACGCGGTGTATTTGAGTGAGCACTTCTGTGAAG
GCACTTTCAACGTTCATGGACTCCAAAGCGGATGTTTCCATGAAAAATGTACTTTCCTTCTCTGCAAATGCTTGGGCATCCTCAGTTGAAAACAG
CACGCAGATGACGCAAATCTGCTTTGTTACCCACCAAGCATTATGACAGATGCTGGAGTCGGTGTGATCTCGGAGCTCTTTTTAACCATCTCCTC
TACATTCTCCAAAAGTTACCATGACG
TTCATACATATAGCGCGATTCAGAATCTTTTTGAAACAAATATACCCTATTTTGGAGGTCCATAAGCAGCCAGCTAATACAATAAATCATTGACC
AATGGAAGCAAAATACAGAAACAAGGATAAAGAATGCTATGAATAAAGCTAATTTGGATATTCAATCTTGGGGCTGCACTCAATTCAACAATGTC
TAGTTGTCCAGTGAATAAAGCTATTAGTGCTAAGCAATTCATGTGGTTAGAGGTTGAAGTACAAATGTCATGTGAAATTCAGCTCAAAACAAAAA
GAATCTCGTCCGCGGTTTAGATTACTCTTTGTTCTAAGCAGAACAGCACCCAGCTTTCTTTACTTCAGAAACATCATCCTTACCTCCTACATTAA
TCGTCTGCCCCTTGGGAAGTGTTGCCGGGTCATCTCCTACTTCAAGAGCTTTCCTGCTAACAACGCGGTGTATTTGAGTGAGCACTTCTGTGAAG
GCACTTTCAACGTTCATGGACTCCAAAGCGGATGTTTCCATGAAAAATGTACTTTCCTTCTCTGCAAATGCTTGGGCATCCTCAGTTGAAAACAG
CACGCAGATGACGCAAATCTGCTTTGTTACCCACCAAGCATTATGACAGATGCTGGAGTCGGTGTGATCTCGGAGCTCTTTTTAACCATCTCCTC
TACATTCTCCAAAAGTTACCATGACG
Unigenes |
Current Unigene builds | |||||
[SGN-E572867] | SGN-U273532 | Solanum tuberosum | Build 4 | 7 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T373899 [Download][View] | Facility Assigned ID: bf_ivrootxx_0015a11.t3m |
Submitter: Rebecca Griffiths | Sequencing Facility: GASF |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.973 | Expected Error Rate: 0.0054 | Quality Trim Threshold: 14.5 |