Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E573162

Search information 
Request: 573162Match: SGN-E573162
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C350462Clone name: 32430
nocartOrdering Not Available
Library Name: IVROOTOrganism: Solanum tuberosum

Tissue: Root
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E573162Length: 691 bp (785 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E573162 [] (trimmed) TTCCCCTCGAATGGATCATGTTGTGGAAGTTGTATCGATTACTAGTGTAGGTGATGATGGCTCTAGTACGAATGATGTTGATCAAGACGATGATC
TTGAATTGGATGGAGAGGGGAATAATCAAGAAATGAGGTGTGGAGTAGTTGAAAATCTTGATGAGGAGGAGGAAGGGAGATCAACGATGGACTTA
TCGATGAAAAATGCACGAGTTAATCTTGATGGAAGGAGGAAAAGGGGTCGTGTTTTTAGTGATTTGGTTGATCAACATAGCGTGAAGGAGATCAT
CAACAATGAACTACAACCAGCACGAAGATCGGTCTCAATGGATTCCTCTGTTGCTCAAGTGATTCACCTCGCGATGAACGAGATGAATTCGAGGA
AAATTGATCAAGGGTGTTCGAGTAATTCAAAGAGAGGAGATAGAAATTCGAGTTTGTATAAAGCAATGAAGAGTTCTTCCTTTGGACGTTCATTG
CAAAAAGTTCCTATTAGTATGAAGAGGTCTTTTTCAACTAGTGGAAAGTGTTCATTGCCTACAACTAGCAAGATTCAAGATCCAAGACAAACAAT
GTAAGAACATTTCACTTTAGTTCTTGAATTCTTCAAGTTGGGTTCAAGATTTTCCTATACATATATGAACAATATATGAAAATATAAAGTGTAAA
AGTAATGTATCACATAAAGGACTTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E573162] SGN-U274641 Solanum tuberosum Build 4 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T374233 [Download][View] Facility Assigned ID: bf_ivrootxx_0018f05.t3m
Submitter: Rebecca Griffiths Sequencing Facility: GASF
Funding Organization: Genome Atlantic
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0010 Quality Trim Threshold: 14.5