EST details — SGN-E573263
| Search information |
| Request: 573263 | Match: SGN-E573263 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C350576 | Clone name: 32546 |
| ||
| Library Name: IVROOT | Organism: Solanum tuberosum |
Tissue: Root
Development Stage:
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E573263 | Length: 685 bp (995 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E573263 [] (trimmed)
GCACGAGGAAGATTTAGAGTTTGGATTCATGGAAAATTGAGAAGAAATCTCCATGGATCGAGTTCTCAAAGCTGCGAGAACTTCTGGTTCTCTCA
ACCTATCGAATCGTTCTCTGAGTGAGGTGCCCATTGACGTATACAAAAGTTTGGATGCAGCCAGTGAGGATGAGAAGTGGTGGGAGGCCGTGGAG
CTACAGAAGCTGATTTTGGCTCATAATGACATAGAAACATTGCAGGAAGACATTCGAAATTTACCTCTACTGTCAGCGTTAAATGTTAGTCACAA
CAAGCTAACCCATCTTCCAGCTGCTATTGGAGAGCTTCATATGCTGAAGTCGTTAGATGTATCATTTAACTTGATAGTGAACATTCCAGAAGAGA
TCGGAACAGCAGCTTCTCTAGTCAAGCTTGATTGTTCAAACAACCAACTAAATGATCTCCCTAACTCCCTTGGAAGATGTGTGGAGTTATCAGAC
CTCAAGGCATCGAACAATAGCATTTCCAGTTTGCCAGCAGATCTAGCGAAGTGTTCAAAATTAACAAAGTTGGATGTCGAGGGAAACAAGTTAAC
TACCCTACCTGAGAGTTTGATTGCATCTTGCAGAATGCTTACTGAACTCAATGCATCAAAAAATTTGCTCAATAGCATTCCAGAAGATATAGGAA
GCCTTTCACGCTTGATTCGC
ACCTATCGAATCGTTCTCTGAGTGAGGTGCCCATTGACGTATACAAAAGTTTGGATGCAGCCAGTGAGGATGAGAAGTGGTGGGAGGCCGTGGAG
CTACAGAAGCTGATTTTGGCTCATAATGACATAGAAACATTGCAGGAAGACATTCGAAATTTACCTCTACTGTCAGCGTTAAATGTTAGTCACAA
CAAGCTAACCCATCTTCCAGCTGCTATTGGAGAGCTTCATATGCTGAAGTCGTTAGATGTATCATTTAACTTGATAGTGAACATTCCAGAAGAGA
TCGGAACAGCAGCTTCTCTAGTCAAGCTTGATTGTTCAAACAACCAACTAAATGATCTCCCTAACTCCCTTGGAAGATGTGTGGAGTTATCAGAC
CTCAAGGCATCGAACAATAGCATTTCCAGTTTGCCAGCAGATCTAGCGAAGTGTTCAAAATTAACAAAGTTGGATGTCGAGGGAAACAAGTTAAC
TACCCTACCTGAGAGTTTGATTGCATCTTGCAGAATGCTTACTGAACTCAATGCATCAAAAAATTTGCTCAATAGCATTCCAGAAGATATAGGAA
GCCTTTCACGCTTGATTCGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E573263] | SGN-U276043 | Solanum tuberosum | Build 4 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T374347 [Download][View] | Facility Assigned ID: bf_ivrootxx_0019h01.t3m |
| Submitter: Rebecca Griffiths | Sequencing Facility: GASF |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 20.5 |
Working
