EST details — SGN-E576733
Search information |
Request: 576733 | Match: SGN-E576733 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C354507 | Clone name: 59997 |
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Library Name: IVROOT | Organism: Solanum tuberosum |
Tissue: Root
Development Stage:
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E576733 | Length: 752 bp (1157 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E576733 [] (trimmed)
CAGCAATAAAGACATGTAGCATTGTTTGCCGGACCTATACATTGTACAAATATCTTAAGACACTTCTTTTGAAAAAGGAAAGTCTCAACTGCTTG
GCCAGTTGCTACTCAATCTGCACAACCATCACAGTGGTGACACAAGAGTATATTTATGATAAATATCAAATATATTACACATCTGGAATTGGTTT
CCTGGACTTCACCATCCATCCAAGCATCAAAAACACAACACATACAGAAAAGAGGGGTCGGCGAGAAGTTTTTAGGAGCTGAGTTCAAGAAATCT
TTGTGCCATGGGATGTTTAGATTCAAAGAGTTGATCAGGCTTTAAAATTTCTACAATCTCTCCATTGACAAGCAGGCATACTATGTCAGCTATTC
TCTTTATTTGTTTGATGCTATGTGAAACCATCACAATGGTCATATTCTGCTCCCTCTTCAGTTTTACAAGAACATCCTCAATATTCTGAGTTGAT
ATTGGATCCAGTGCACTTGTTGGCTCATCCAGCAGCAGAACCTCTGGTTCATTGGCCAAGGTCCTAGCAAGTGCAACTCTCTGTGCTTGACCAAC
AGAGAGTTCCCCACCAGACTTGTTGAAGAAAGATGAGTCCAGGTCAGCTAGAGTCAGCAACTTGTATACCTCATTGTCACTTAGTTTTTTTCCTT
TTAACTGTGGCCCATATCGTACATTATCTGCAACAGTACCTTCAAAGAGAACAGGAATCTGAAACAGCATGCCAATCTTCCGGCGGA
GCCAGTTGCTACTCAATCTGCACAACCATCACAGTGGTGACACAAGAGTATATTTATGATAAATATCAAATATATTACACATCTGGAATTGGTTT
CCTGGACTTCACCATCCATCCAAGCATCAAAAACACAACACATACAGAAAAGAGGGGTCGGCGAGAAGTTTTTAGGAGCTGAGTTCAAGAAATCT
TTGTGCCATGGGATGTTTAGATTCAAAGAGTTGATCAGGCTTTAAAATTTCTACAATCTCTCCATTGACAAGCAGGCATACTATGTCAGCTATTC
TCTTTATTTGTTTGATGCTATGTGAAACCATCACAATGGTCATATTCTGCTCCCTCTTCAGTTTTACAAGAACATCCTCAATATTCTGAGTTGAT
ATTGGATCCAGTGCACTTGTTGGCTCATCCAGCAGCAGAACCTCTGGTTCATTGGCCAAGGTCCTAGCAAGTGCAACTCTCTGTGCTTGACCAAC
AGAGAGTTCCCCACCAGACTTGTTGAAGAAAGATGAGTCCAGGTCAGCTAGAGTCAGCAACTTGTATACCTCATTGTCACTTAGTTTTTTTCCTT
TTAACTGTGGCCCATATCGTACATTATCTGCAACAGTACCTTCAAAGAGAACAGGAATCTGAAACAGCATGCCAATCTTCCGGCGGA
Unigenes |
Current Unigene builds | |||||
[SGN-E576733] | SGN-U273212 | Solanum tuberosum | Build 4 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T378278 [Download][View] | Facility Assigned ID: bf_ivrootxx_0063c10.t3m |
Submitter: Rebecca Griffiths | Sequencing Facility: GASF |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.966 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 14.5 |