EST details — SGN-E577285
Search information |
Request: 577285 | Match: SGN-E577285 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C352381 | Clone name: 34389 |
| ||
Library Name: IVROOT | Organism: Solanum tuberosum |
Tissue: Root
Development Stage:
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E577285 | Length: 503 bp (1045 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E577285 [] (trimmed)
GCATATATCACCTTTATACAATGGCTCATAAGTATATCCCATCTTTTTTCTTGTGATTATTATGTCACTGTTATATTTTAACAAGTAGTTATGTG
ATTCAAGCACAAGCGCGCAATCTTCTTGAAGTAACTATCCCTGAACTTCCTAAGCCAGAATTGCCACATTTACCGTGAAATCCCAATCTTTGCCT
AAGCTTGAATTCCCTGAAATTCCTGAAACCTGAGTTGCCTACTCTACCAAAACCCGTAATTTCCAGAAATCCCAAAGCCGGAGTTTCCACCATTT
CCAAAGGCTGAACTTCCAACGTTACCATAACTCGAGATTCCTGTCATTCCTAAACCTGAATTGCCAACTTTGTCAAAGCCAGAAATCCCTCAAGT
GCCTAAAAAGCCTTGAGCGCGACCGAAGCAGCATTGTTAATTTAAATGTATTGTGTTGTGTGATCATATATGTATTTCTTTGTTGTGCTATACAA
TCTGCCATTTGATAATACATCAGGAATG
ATTCAAGCACAAGCGCGCAATCTTCTTGAAGTAACTATCCCTGAACTTCCTAAGCCAGAATTGCCACATTTACCGTGAAATCCCAATCTTTGCCT
AAGCTTGAATTCCCTGAAATTCCTGAAACCTGAGTTGCCTACTCTACCAAAACCCGTAATTTCCAGAAATCCCAAAGCCGGAGTTTCCACCATTT
CCAAAGGCTGAACTTCCAACGTTACCATAACTCGAGATTCCTGTCATTCCTAAACCTGAATTGCCAACTTTGTCAAAGCCAGAAATCCCTCAAGT
GCCTAAAAAGCCTTGAGCGCGACCGAAGCAGCATTGTTAATTTAAATGTATTGTGTTGTGTGATCATATATGTATTTCTTTGTTGTGCTATACAA
TCTGCCATTTGATAATACATCAGGAATG
Unigenes |
Current Unigene builds | |||||
[SGN-E577285] | SGN-U270631 | Solanum tuberosum | Build 4 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T376152 [Download][View] | Facility Assigned ID: bf_ivrootxx_0039a10.t3m |
Submitter: Rebecca Griffiths | Sequencing Facility: GASF |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.961 | Expected Error Rate: 0.0129 | Quality Trim Threshold: 12.5 |