Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E580731

Search information 
Request: 580731Match: SGN-E580731
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C358603Clone name: 5974
nocartOrdering Not Available
Library Name: ACDAOrganism: Solanum tuberosum

Tissue: Tubers
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E580731Length: 581 bp (1000 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E580731 [] (trimmed) GCCAAGGTTCAGCGAAGCTGTCTCTCTTCCACTTTCAAAGAATCTAAGGCATTATGGGTAAGGAAAAGATTCACATCAGTATTGTGGTCATTGGC
CATGTCGACTCTGGAAAGTCCACTACCACTGGTCACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTTATTGAGAGGTTTGAGAAGGAAGC
TGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTTGACAAACTTAAGGCTGAACGTGAGCGTGGTATCACCATTGATATTGCTTTGT
GGAAGTTTGAGACCACTAAGTACTACTGCACTGTGATTGATGCCCCCGGGACACAGAGACTTTATCAAGAACATGATCACTGGTACCTCCCAGGC
TGACTGTGCTGTCCTCATTATTGACTCCACCACTGGTGGTTTTGAAGCTGGTATCTCTAAAGATGGTCAGACACGTGAACATGCATTGCTTGCTT
TTACCCTTGGTGTCAAGCAAATGATTTGCTGCTGTAACAAGATGGATGCTACCACCCCCAAGTACTCCAAGGGCTAGTATGATGAAATTGTGCAA
GGAAGTTCTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E580731] SGN-U277726 Solanum tuberosum Build 4 467 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T381607 [Download][View] Facility Assigned ID: ACDA00718D10.T3m
Submitter: Rebecca Griffiths Sequencing Facility: GASF
Funding Organization: Genome Atlantic
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0056 Quality Trim Threshold: 14.5