EST details — SGN-E626105
Search information |
Request: 626105 | Match: SGN-E626105 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C414258 | Clone name: cccp28a2 |
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Library Name: cccp | Organism: Coffea canephora |
Tissue: Pericarp
Development Stage: All development stages combined
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E626105 | Length: 626 bp (979 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E626105 [] (trimmed)
GCTCTAAGCAGCCTCTTCAAGAGAAAATCCTCAATTCCCTTTAATGGCCTTATCAGAAGTAGCAGGCTGTTCTCCACTGAAACTTTACTTGATAA
TTGTCCATCTTTCGCCCAGAGATTGAGAGATCTGCCCAAAGATTTTCCAGGGACCAACATCAGAAAAGAGGCTTCTCAGCTGATTGGGAGAACAC
CAATTGTTTATCTGAATAGAGTTACAGAAGGCTGTGGTGCTTACATAGCGGCTAAGCAAGAAATGTTTCAGCCAACTGCAAGCATTAAAGACAGA
CCAGCATTTGCTATGATCGCCGATGCAGAAAAGAAAGGCTTGATCTCACCTGGAGAGACAACACTGATCGAGCCCACATCCGGAAATATGGGGAT
TAGTATGGCATTTATGGCAGCCTTGAAAGGTTACAAGATGGTTTTGACAATGCCCTCTTATACCAGCTTAGAGAGAAGAGTGACTATGAGAACAT
TTGGAGCTGAGTTAATCCTCACGGACCCAACCAAAGGCATGGGAGGAACAGTTAAGAAAGCTGACCAGCTGGTGGAGAAGACTCCCAATGGTTTT
ATGCTTCCACAGTTTTCTAATCCTGCAAATACCCAGGTGCATTTTGAGACAACTGG
TTGTCCATCTTTCGCCCAGAGATTGAGAGATCTGCCCAAAGATTTTCCAGGGACCAACATCAGAAAAGAGGCTTCTCAGCTGATTGGGAGAACAC
CAATTGTTTATCTGAATAGAGTTACAGAAGGCTGTGGTGCTTACATAGCGGCTAAGCAAGAAATGTTTCAGCCAACTGCAAGCATTAAAGACAGA
CCAGCATTTGCTATGATCGCCGATGCAGAAAAGAAAGGCTTGATCTCACCTGGAGAGACAACACTGATCGAGCCCACATCCGGAAATATGGGGAT
TAGTATGGCATTTATGGCAGCCTTGAAAGGTTACAAGATGGTTTTGACAATGCCCTCTTATACCAGCTTAGAGAGAAGAGTGACTATGAGAACAT
TTGGAGCTGAGTTAATCCTCACGGACCCAACCAAAGGCATGGGAGGAACAGTTAAGAAAGCTGACCAGCTGGTGGAGAAGACTCCCAATGGTTTT
ATGCTTCCACAGTTTTCTAATCCTGCAAATACCCAGGTGCATTTTGAGACAACTGG
Unigenes |
Current Unigene builds | |||||
[SGN-E626105] | SGN-U615382 | Coffea canephora | Build 3 | 6 ESTs assembled | |
[SGN-E626105] | SGN-U638378 | Coffee species | Build 1 | 17 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T438121 [Download] [View] | Facility Assigned ID: cccp28a2.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |