EST details — SGN-E627489
Search information |
Request: 627489 | Match: SGN-E627489 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C415109 | Clone name: cccp6e12 |
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Library Name: cccp | Organism: Coffea canephora |
Tissue: Pericarp
Development Stage: All development stages combined
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E627489 | Length: 464 bp (566 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E627489 [] (trimmed)
GATTTGCCACACCTATAGCTGTCTAATATTTGACTACTATATTTTATTTTTTTCTCCCAGTCTATTTATTCCTTTTTCTTTTTTCTTGTAAGTAT
CATTCAAGGAAATTGCTCGTGCAGAGAAGAACTAGATAACAGGGAAAACCGAAAAGGGATCGTCTTCGACAAAAGTGAATTACAGCTGAAGTCTG
TCTTATAGCTGAATTGGCAGGGTTATGATTGCTAATGATGATGATTTTACCTTTTGTCAAGTTGGTGTTAATGAGGATAAAGATGCAATTGATGC
ACAAGAAGTAGTTGAAAATATTAGTGGCCTCAGAATACAAGATGAGTCAGTGAATGACCATGATTCTGGTCAGGCCAGTGGCATACTATGGAATG
ATAAGTTGCCTCGTACCACTGCTTCATCAAAGGAAGAAAGAAAAGGATCGCTGTCTTTCAGTGTAATTGATACATCTTCCAGCG
CATTCAAGGAAATTGCTCGTGCAGAGAAGAACTAGATAACAGGGAAAACCGAAAAGGGATCGTCTTCGACAAAAGTGAATTACAGCTGAAGTCTG
TCTTATAGCTGAATTGGCAGGGTTATGATTGCTAATGATGATGATTTTACCTTTTGTCAAGTTGGTGTTAATGAGGATAAAGATGCAATTGATGC
ACAAGAAGTAGTTGAAAATATTAGTGGCCTCAGAATACAAGATGAGTCAGTGAATGACCATGATTCTGGTCAGGCCAGTGGCATACTATGGAATG
ATAAGTTGCCTCGTACCACTGCTTCATCAAAGGAAGAAAGAAAAGGATCGCTGTCTTTCAGTGTAATTGATACATCTTCCAGCG
Unigenes |
Current Unigene builds | |||||
[SGN-E627489] | SGN-U613634 | Coffea canephora | Build 3 | 12 ESTs assembled | |
[SGN-E627489] | SGN-U638337 | Coffee species | Build 1 | 23 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T438972 [Download] [View] | Facility Assigned ID: cccp6e12.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |