EST details — SGN-E628877
Search information |
Request: 628877 | Match: SGN-E628877 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C415985 | Clone name: cccp21sh2 |
| ||
Library Name: cccp | Organism: Coffea canephora |
Tissue: Pericarp
Development Stage: All development stages combined
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E628877 | Length: 760 bp (970 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E628877 [] (trimmed)
GCGTGCACCTACCTACAAAGACAGTTATGACAGCCAGACCATTCTCATTCCCATGATTCCATTTCATGCCTAGTATTCATATTCTTCTTCTTCTG
GTGCGACTGAATCAAAATTCACGAAGAGATTAAGGTGAGGGAGACCAGAGAATTGATCAGAACAACGATGGCAGTTGCTAATGAGAAACCACCAA
TGTCTGAAGTTAAGGTTTGGAGTTTCTGTAGATTGCCTTTCTGGCAATCCACCAATAATGCAGCTGCCGGTGGTGGTGGTGGCAGTGGTTCTTCA
TCCTTGCAGCAAAACCATCTTGCTGCTGCTGATCATCAACCTTCCATCAAGGTCGCTTCTGTGGCCAAGTCCTTTCTTCCTACTCGCCGTAGACT
CGGTCTTGATCCCCCCAACAAGCTCTATTTTCCCTATGAACCTGGTAAACAAGTCAAAAGTGCAATTCGGATTAGAAACATCAGCAAGACTCATG
TTGCCTTCAAGTTCCAAACAACTGCACCAAAGAGTTGTTACATGCGTCCTCCGGGAGGCATACTTGCTCCTGATGAGAGTCTAATTGCCACAGTT
TTCAAGTTTGTGGAGCCTCCAGAGTCCAATGACAAACTGGATGGTCTAAAGAGCAGGGTCAAGTTCAAGATCATGAGCTTGAAAGGTAAGGGAGA
CATGGATTATGTACCTGAGCTGTTTGATGAGCAAAGGGATCAAGTTGCAGTTGAACAGATCCTGCGGGTTGCTTTCCTGGAACCTGATCATCCTA
GTGCGACTGAATCAAAATTCACGAAGAGATTAAGGTGAGGGAGACCAGAGAATTGATCAGAACAACGATGGCAGTTGCTAATGAGAAACCACCAA
TGTCTGAAGTTAAGGTTTGGAGTTTCTGTAGATTGCCTTTCTGGCAATCCACCAATAATGCAGCTGCCGGTGGTGGTGGTGGCAGTGGTTCTTCA
TCCTTGCAGCAAAACCATCTTGCTGCTGCTGATCATCAACCTTCCATCAAGGTCGCTTCTGTGGCCAAGTCCTTTCTTCCTACTCGCCGTAGACT
CGGTCTTGATCCCCCCAACAAGCTCTATTTTCCCTATGAACCTGGTAAACAAGTCAAAAGTGCAATTCGGATTAGAAACATCAGCAAGACTCATG
TTGCCTTCAAGTTCCAAACAACTGCACCAAAGAGTTGTTACATGCGTCCTCCGGGAGGCATACTTGCTCCTGATGAGAGTCTAATTGCCACAGTT
TTCAAGTTTGTGGAGCCTCCAGAGTCCAATGACAAACTGGATGGTCTAAAGAGCAGGGTCAAGTTCAAGATCATGAGCTTGAAAGGTAAGGGAGA
CATGGATTATGTACCTGAGCTGTTTGATGAGCAAAGGGATCAAGTTGCAGTTGAACAGATCCTGCGGGTTGCTTTCCTGGAACCTGATCATCCTA
Unigenes |
Current Unigene builds | |||||
[SGN-E628877] | SGN-U618529 | Coffea canephora | Build 3 | 4 ESTs assembled | |
[SGN-E628877] | SGN-U635703 | Coffee species | Build 1 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T439848 [Download] [View] | Facility Assigned ID: cccp21sh2.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |