EST details — SGN-E638142

Search information 
Request: 638142Match: SGN-E638142
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C439052Clone name: cccs30w9i1
nocartOrdering Not Available
Library Name: cccs30wOrganism: Coffea canephora

Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C439052 [cccs30w9i1] Trace: SGN-T462915 EST: SGN-E629401 Direction: 5' Facility: Cornell
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Sequence 
Sequence Id: SGN-E638142Length: 499 bp (604 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E638142 [] (trimmed) GGCTGTTCAGCCGGCTTTTTGCCAAGAAGGAGATGCGCATTCTGATGGTGGGTCTTGATGCAGCTGGTAAGACCACCATCTTGTACAAGCTCAAG
CTCGGAGAGATCGTTACCACAATTCCCACCATTGGTTTTAATGTTGAGACTGTTGAGTATAAGAATATTAGCTTTACTGTTTGGGATGTTGGGGG
TCAGGACAAGATTCGTCCTTTGTGGAGGCACTACTTCCAAAATACTCAGGGTCTTATATTTGTGGTAGATAGCAATGATAGGGACCGTGTTGTGG
AGGCAAGGGATGAATTACACAGGATGTTGAATGAGGATGAGCTACGTGATGCAGTATTACTTGTATTTGCTAACAAACAAGATCTTCCTAATGCA
ATGAATGCTGCTGAAATAACTGATAAGCTTGGCCTCCACTCCCTCAGGCAGCGCCACTGGTATATCCAAAGCACCTGTGCAACTTCTGGAGAGGG
GCTCTACGAAGGCCTGGATTGGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E638142] SGN-U615591 Coffea canephora Build 3 70 ESTs assembled
[SGN-E638142] SGN-U633546 Coffee species Build 1 101 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T465104 [Download] [View] Facility Assigned ID: cccs30w9i1.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15