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EST details — SGN-E643889

Search information 
Request: 643889Match: SGN-E643889
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C443745Clone name: cccs30w24n23
nocartOrdering Not Available
Library Name: cccs30wOrganism: Coffea canephora

Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C443745 [cccs30w24n23] Trace: SGN-T467979 EST: SGN-E644260 Direction: 5' Facility: Cornell
Clone: SGN-C443745 [cccs30w24n23] Trace: SGN-T468790 EST: SGN-E645071 Direction: 5' Facility: Cornell
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E643889Length: 672 bp (994 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E643889 [] (trimmed) CAGGGTTTGAAGACAGGCTCTTCACTTTGCAGATTTGGGATACAGCAGGGCAGGAAAGGTTTCAGAGCCTTGGTGTTGCTTTCTATCGTGGTGCG
GATTGCTGCGTCCTTGTTTACGATGTGAATGTGATGAAGTCTTTTGATAATCTAAATAATTGGAGGGAAGAGTTCCTCATACAGGCCAGTCCTTC
AGATCCAGATAATTTTCCATTTGTTGTGCTGGGAAACAAGATTGATGTGGATGGTGGAAATAGTAGAGTGGTGTCTGAGAAAAAGGCCCGAGCAT
GGTGTGCCTCTAAGGGAAACATTCCGTACTTTGAGACTTCTGCAAAGGATGGCACAAATGTGGAAGAAGCTTTTCAATGCATTGCCAAAAATGCC
TTAAAAAGTGAAGAAGAAGAAGAAATATACTTGCCTGACACTATTGATGTTGCAAGCAGCAGCCAGCAGAGGTCATCTGGGTGCGAGTGTTAAAT
TGAGTAACATGGTCTTGAGTCTGATTACAGAACAAATCCTCCAAAGCACTCCATCATCTGGCTCATCTTCATTTTATTTATTTGATTTATGAGGC
CAAACTTGTACATTGATGTTTGCGTGAGAAAGCTGATGGTCTCTGGATGTTTGTTGACTTTCAGAGTTTATCCTCCTCTGTATCTATTGCCTGTT
TTCATGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E643889] SGN-U617985 Coffea canephora Build 3 4 ESTs assembled
[SGN-E643889] SGN-U633360 Coffee species Build 1 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T467608 [Download] [View] Facility Assigned ID: cccs30w24n23_1.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15