EST details — SGN-E644747
Search information |
Request: 644747 | Match: SGN-E644747 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C444271 | Clone name: cccs30w24c3 |
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Library Name: cccs30w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C444271 [cccs30w24c3] | Trace: SGN-T471239 | EST: SGN-E647520 | Direction: 5' | Facility: Cornell |
Clone: SGN-C444271 [cccs30w24c3] | Trace: SGN-T468134 | EST: SGN-E644415 | Direction: 5' | Facility: Cornell |
Sequence |
Sequence Id: SGN-E644747 | Length: 627 bp (984 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E644747 [] (trimmed)
CAGGACAAGAGCGTTTTAGAACAATAACTAGTAGCTACTACCGTGGGGCACACGGCATCATAATAGTGTATGATATAACTGATCAAGAGAGCTTT
AATAATGTCAAGCAATGGTTAAACGAAATAGATCGTTATGCAAGTGAAAATGTAAACAAGCTGCTGGTTGGAAACAAGTCTGACCTGGCTGATAA
CAGAGCTGTGTCTTATGATACAGCCAAGGCTTTTGCGGACGAAATTGGCATTCCTTTCATGGAGACCAGTGCAAAGAATGCCAGTAATGTCGAGC
AAGCTTTCATGGTTATGGCAGCTGACATCAAGAATAGGATGGCGAGTCAACCTTCTGCAAACACTGCAAGGCCTCCTACAGTTCAGATAAAGGGC
CAACCGGTAAACCAAAAGAGTGGATGCTGTTCTTAGTGAGCAACCCGGTTCTTGAACAATATCTCAGTCATATCCTGCTAAGGAGGCTTGTCACC
TGCGATGCCAATTGTTGGTCCCTGTCGTAGTTATTTTATATATAAGCTACTCAAGTTCTATTCTTTCAAATGGATTGGATTTTGTAGTGTCCAAC
TTAACCATTGTATTGGATTTGTTGGATTGATAACAAATTTTTTGGTGTTCCACTGTT
AATAATGTCAAGCAATGGTTAAACGAAATAGATCGTTATGCAAGTGAAAATGTAAACAAGCTGCTGGTTGGAAACAAGTCTGACCTGGCTGATAA
CAGAGCTGTGTCTTATGATACAGCCAAGGCTTTTGCGGACGAAATTGGCATTCCTTTCATGGAGACCAGTGCAAAGAATGCCAGTAATGTCGAGC
AAGCTTTCATGGTTATGGCAGCTGACATCAAGAATAGGATGGCGAGTCAACCTTCTGCAAACACTGCAAGGCCTCCTACAGTTCAGATAAAGGGC
CAACCGGTAAACCAAAAGAGTGGATGCTGTTCTTAGTGAGCAACCCGGTTCTTGAACAATATCTCAGTCATATCCTGCTAAGGAGGCTTGTCACC
TGCGATGCCAATTGTTGGTCCCTGTCGTAGTTATTTTATATATAAGCTACTCAAGTTCTATTCTTTCAAATGGATTGGATTTTGTAGTGTCCAAC
TTAACCATTGTATTGGATTTGTTGGATTGATAACAAATTTTTTGGTGTTCCACTGTT
Unigenes |
Current Unigene builds | |||||
[SGN-E644747] | SGN-U618192 | Coffea canephora | Build 3 | 8 ESTs assembled | |
[SGN-E644747] | SGN-U630798 | Coffee species | Build 1 | 17 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T468466 [Download] [View] | Facility Assigned ID: cccs30w24c3_1.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |