Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E645627

Search information 
Request: 645627Match: SGN-E645627
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C445483Clone name: cccs30w27j18
nocartOrdering Not Available
Library Name: cccs30wOrganism: Coffea canephora

Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E645627Length: 724 bp (1014 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E645627 [] (trimmed) GAACTGCAACAAAATCTGGTCATAAAACTGAGGATGACCAGAAGTTGAAAGATAGGACCACAAAGTCTGTAGCTAAGAGTGAGGATGACAGCACT
GGTAAAGCTAAATCTCAAAGAACTGGTGATAAACATCCTGATGATTTCACAAAAACATCTGTCAAATCTAAAGATGTTGATACTAGCACACCCAA
AGCCAAATCCAAGCAAGACATTCCAAAGACTGGTAGCATGTCGAAGCAAGACACTCCGAAGACTGGTATAAAGTCCAAAAGTAAGACCCCCCAAG
CTGGTGGTGATGGTAGTGCAAATGGAACGGGAAAGATAAAACATAGCTCTTCAAAGATGAAAGAGACCGAGGATTTGAAAGAAAGATCCAAAGAT
AAGTCTACTGATGTGCTAAAAACACCTGAAGGGGTAAAAGTCAAATCGTCAGAAGCGTCTAAGGTCCAAGAAAAAAATCAAAGCGTGAAGAAGCG
ACGGAGAGCAGGCTAGGATATGTTTCATGTTGCTACATCTGCTCAGTTCCTTCTGATGCATTGCATCGTCGTTCTGGAGCTGGATGTCTGAGAGT
CATGTCTATTATACTCTTGTCAGATGTAATCCTGAATCATTGGCTTCATTTGCTTCCATTAGGCAGTTTAGATAAGAGGAGGTCGTAGGAGTTAA
ATTTATTTTGTTGTTCAGTCAGGACTTCTTTTGGTTAGTGTCGTGTTATTGTTTGTTAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E645627] SGN-U619795 Coffea canephora Build 3 11 ESTs assembled
[SGN-E645627] SGN-U634567 Coffee species Build 1 27 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T469346 [Download] [View] Facility Assigned ID: cccs30w27j18.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15