EST details — SGN-E646674

Search information 
Request: 646674Match: SGN-E646674
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C443517Clone name: cccs30w23o19
nocartOrdering Not Available
Library Name: cccs30wOrganism: Coffea canephora

Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C443517 [cccs30w23o19] Trace: SGN-T471609 EST: SGN-E647890 Direction: 5' Facility: Cornell
Clone: SGN-C443517 [cccs30w23o19] Trace: SGN-T467380 EST: SGN-E643661 Direction: 5' Facility: Cornell
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Sequence 
Sequence Id: SGN-E646674Length: 730 bp (1020 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E646674 [] (trimmed) GGCAGAACAGGCCTGCCTGGTACAAGGAGAAAGTTTACCCACCCAACAAGGTGCCATCTCTGGAACATAATAATGAAGTTAAAGGAGAGTCTCTT
GATCTGATAAAATATCTGGAGGGTAACTTTGAAGGTCCTTCACTTCTTCCTGACGATCCAGCCAAGAGAGAGTTTGCAGAAGAGTTGCTGTCCTA
TACCAACTCCTTCAATCAAGCTGTGGTTTCTTCTTTCAAGGCAGATTCAATTAATGAAGCTGGTGCTGCCTTTGATTACCTTGAGAACGCCCTTG
GCAAATTTGGGGATGGTCCCTTTGTCCTTGGAACTTTTAGTCTGGTAGATATAGCTTATGCTCCGTTCATTGAGAGGTATCAACCCTTCTTGTTG
GATGTGAAGAAGTACAATATTACAGAGGGCAGGCCAAAACTGGCAGCATGGATTCAGGAGATTAACAAGATTGAGGCTTATGAAGTGACAAAACG
TGACCCAAAGGAGCTTGCAGAAGCCTTCAAAAGGCGTTTCTCGTCTCGGCTCTGAGCTGTCGCAACCCCAAGATATTTCATGGAAATGGAACAAG
TATACTCGTCATCTCGGAGGAATTTTATGATGCAAGATTGTACCTCGCCTGTAACACCTGTAATAAAAGCCACTAGTTGATCTCAGTAATCATTG
TTAGAAGTCTTCCGGTTGTGAGCAGCTGTTTGATAAACCTTCTGCGGACTTAATAGTCTTTACTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E646674] SGN-U619299 Coffea canephora Build 3 6 ESTs assembled
[SGN-E646674] SGN-U629188 Coffee species Build 1 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T470393 [Download] [View] Facility Assigned ID: cccs30w23o19_1.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15