EST details — SGN-E647889
| Search information |
| Request: 647889 | Match: SGN-E647889 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C445179 | Clone name: cccs30w24b4 |
| ||
| Library Name: cccs30w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C445179 [cccs30w24b4] | Trace: SGN-T471931 | EST: SGN-E648212 | Direction: 5' | Facility: Cornell |
| Clone: SGN-C445179 [cccs30w24b4] | Trace: SGN-T469042 | EST: SGN-E645323 | Direction: 5' | Facility: Cornell |
| Sequence |
| Sequence Id: SGN-E647889 | Length: 718 bp (989 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E647889 [] (trimmed)
GATCCACTCTTTCCCGGTCTGCCTCCACCACCTCCTGATCATACTTTGCTTTCTGATGGCAAGCATCCTACCCAGCCATCTGGACTCTATGTCTC
CCTCTCCGTGTCTCTTGGTGTTTTAGCCACAACTTTCTTGATTTTCTCTATCTACATGATATACAAGTTTTATAAACGTCGGTATACGTCTTCAA
GGAGTAGGCAATTGATTCCACAGCCCCAGCAGCAGCCTCGAGAGGATGAAGAAGCCCATCTGGATTTTCTTGATGAAGATCAGGGTCCCGTGGTT
GACCATCCCATATGGTATATCAGGACAGTTGGTCTTCAGCCGTCTGTGATTAATGCAATCACTATTTGTAAGTATAAAAGAGGTGATGGACTGGT
GGAAGGAACAGAGTGCTCTGTTTGCTTGAATGAATTTCAAGAAGATGAGACTTTAAGGCTGCTGCCCAAGTGTAATCATGCTTTTCATATACCTT
GCATTGATACTTGGCTCAGATCACACACCAATTGCCCCAATTGCCGAGCTGGGATTGTTGTGAGCACGGCTCACCTCCAGTCTTCGTCGCAGAGT
CATCATAATTCAGGTCGTGTGGAGGAAATCCACATGGGAGTTTCGGAAAATAATAGGGATTCCGAGAGAGAAAGGGAAAGGGAAGTGAGGTTCTT
GAAGTCGGTGTTGAAGCGGAACAGGAAAATGAATCAAGGGTAGGACCGGGAAT
CCTCTCCGTGTCTCTTGGTGTTTTAGCCACAACTTTCTTGATTTTCTCTATCTACATGATATACAAGTTTTATAAACGTCGGTATACGTCTTCAA
GGAGTAGGCAATTGATTCCACAGCCCCAGCAGCAGCCTCGAGAGGATGAAGAAGCCCATCTGGATTTTCTTGATGAAGATCAGGGTCCCGTGGTT
GACCATCCCATATGGTATATCAGGACAGTTGGTCTTCAGCCGTCTGTGATTAATGCAATCACTATTTGTAAGTATAAAAGAGGTGATGGACTGGT
GGAAGGAACAGAGTGCTCTGTTTGCTTGAATGAATTTCAAGAAGATGAGACTTTAAGGCTGCTGCCCAAGTGTAATCATGCTTTTCATATACCTT
GCATTGATACTTGGCTCAGATCACACACCAATTGCCCCAATTGCCGAGCTGGGATTGTTGTGAGCACGGCTCACCTCCAGTCTTCGTCGCAGAGT
CATCATAATTCAGGTCGTGTGGAGGAAATCCACATGGGAGTTTCGGAAAATAATAGGGATTCCGAGAGAGAAAGGGAAAGGGAAGTGAGGTTCTT
GAAGTCGGTGTTGAAGCGGAACAGGAAAATGAATCAAGGGTAGGACCGGGAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E647889] | SGN-U616273 | Coffea canephora | Build 3 | 4 ESTs assembled | |
| [SGN-E647889] | SGN-U629638 | Coffee species | Build 1 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T471608 [Download] [View] | Facility Assigned ID: cccs30w24b4_2.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
