EST details — SGN-E650202
Search information |
Request: 650202 | Match: SGN-E650202 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C450058 | Clone name: cccs30w19g18 |
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Library Name: cccs30w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C450058 [cccs30w19g18] | Trace: SGN-T475048 | EST: SGN-E651835 | Direction: 5' | Facility: Cornell |
Sequence |
Sequence Id: SGN-E650202 | Length: 320 bp (1099 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E650202 [] (trimmed)
CAGGAATTCGTTTCCAGGAATTCATCTTTTTCCTTTTCCAGCGATCTCCAATTGGGGTTGCTTCAAAAGAGGTTCAGATTAAAAAAAGTAGCTGA
AAGATGTGGAACTCTGGCCAGGTTGAAATGAAACATTCATCAAGCAGGACCCACTGTTGGCTTTCCCGAAAGCTATGGGAGAATTTTTCTTTTAT
ATTGCGCTACCTGATTTAATCTTATATGATTTCACATATGCTGATTCACGAACCAACTTAGTATTTCATCATTTGTTCCCTTTTGTCTTGCAATT
TTTTCTGAACTTGTTTACTGCCGGAGTTCTGTCTG
AAGATGTGGAACTCTGGCCAGGTTGAAATGAAACATTCATCAAGCAGGACCCACTGTTGGCTTTCCCGAAAGCTATGGGAGAATTTTTCTTTTAT
ATTGCGCTACCTGATTTAATCTTATATGATTTCACATATGCTGATTCACGAACCAACTTAGTATTTCATCATTTGTTCCCTTTTGTCTTGCAATT
TTTTCTGAACTTGTTTACTGCCGGAGTTCTGTCTG
Unigenes |
Current Unigene builds | |||||
[SGN-E650202] | SGN-U615590 | Coffea canephora | Build 3 | 7 ESTs assembled | |
[SGN-E650202] | SGN-U633547 | Coffee species | Build 1 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T473921 [Download] [View] | Facility Assigned ID: cccs30w19g18_1.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |