EST details — SGN-E653431
| Search information |
| Request: 653431 | Match: SGN-E653431 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C451664 | Clone name: cccs30w17f9 |
| ||
| Library Name: cccs30w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C451664 [cccs30w17f9] | Trace: SGN-T476422 | EST: SGN-E655334 | Direction: 5' | Facility: Cornell |
| Sequence |
| Sequence Id: SGN-E653431 | Length: 675 bp (989 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E653431 [] (trimmed)
CAGGGAGAATAGGCGGGTGTTATTTGATAACAAGACGAAGGATGCAGCCAAGAAAGCTGAACAACTTCAGCAACTTCTTTCTCTTGTGAATGATG
TTGTGATGAAAAATGGAGGAAAACCATTTTCTAACGATTTATTTGTTGAATTTAAGAAAGGAGTCACAAAACTTCATGATCAAGCTGCAGAGCTG
AGTTCTTTGGAAGGGTACTCCAAAAATGAGAAATCTGAGTTGGAGGTGCAGATTCGGGCTTCATATCAGGAGCATCTGAAACAATTTACTGATAT
GGTTGAGACAAAGATTATGGATGCAACACGTAGATTTGAACAGAAACTGACAGAGGAGCAAGCTGCTCGCTTAAAAGCAGAGGAAGCTGCCCAAG
CAGCTCAAATGAAATCAAATGATGAGATCCGTCTGTTGAGAGAGCATATAGAGAGAGTCGAGAGGGAGAATAGGGAGCTCAGAAAGCATGCCGAA
CGTGGGGGTTGTCAAATTTTATGATGGGATACTTCAGATACTGTGCACATCTGGTGGGAGGGTGGCTGCATGCACTTTCTGGAAAAATAAAGACA
TCTTACGGTTACACATTATAAATTTTTAGTTTTGTTTATTGTGGTCCTGTTGCCTACTTATCACTGTACTGTTATATAGGTGTCCATCTTTGAGT
GGCTTCCTCG
TTGTGATGAAAAATGGAGGAAAACCATTTTCTAACGATTTATTTGTTGAATTTAAGAAAGGAGTCACAAAACTTCATGATCAAGCTGCAGAGCTG
AGTTCTTTGGAAGGGTACTCCAAAAATGAGAAATCTGAGTTGGAGGTGCAGATTCGGGCTTCATATCAGGAGCATCTGAAACAATTTACTGATAT
GGTTGAGACAAAGATTATGGATGCAACACGTAGATTTGAACAGAAACTGACAGAGGAGCAAGCTGCTCGCTTAAAAGCAGAGGAAGCTGCCCAAG
CAGCTCAAATGAAATCAAATGATGAGATCCGTCTGTTGAGAGAGCATATAGAGAGAGTCGAGAGGGAGAATAGGGAGCTCAGAAAGCATGCCGAA
CGTGGGGGTTGTCAAATTTTATGATGGGATACTTCAGATACTGTGCACATCTGGTGGGAGGGTGGCTGCATGCACTTTCTGGAAAAATAAAGACA
TCTTACGGTTACACATTATAAATTTTTAGTTTTGTTTATTGTGGTCCTGTTGCCTACTTATCACTGTACTGTTATATAGGTGTCCATCTTTGAGT
GGCTTCCTCG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E653431] | SGN-U619009 | Coffea canephora | Build 3 | 8 ESTs assembled | |
| [SGN-E653431] | SGN-U630745 | Coffee species | Build 1 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T475527 [Download] [View] | Facility Assigned ID: cccs30w17f9_1.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
