EST details — SGN-E654777
Search information |
Request: 654777 | Match: SGN-E654777 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C404339 | Clone name: cccl8m16 |
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Library Name: cccl | Organism: Coffea canephora |
Tissue: LeafB
Development Stage: Young
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E654777 | Length: 708 bp (988 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E654777 [] (trimmed)
GGCGTTCCGTTGACCAATGCGCCGAATGTGGACTTATATTGACATTCTCTGGCTTCCGTGATACAATAAATATTGGTAGTGATGAAATGGTAAGC
ATGAATGAAATGGCTGAGATTGTTCTTAGCTTCGAGGACAAGAAGCTGCCCATCCACCACATTCCTGGCCCTGAAGGTGTTCGTGGTCGTAATTC
CAATAACACTCTAATCAAGGAAAAACTTGGTTGGGCTCCGAGTATGAGACTCAAGGATGGGCTGAGAATTACATACTTTTGGATTAAAGAGCAAA
TTGAAAAGGAGAAAGGTCATGGTGTGGATTTATCAATCTATGGCACTTCTAAGGTGGTGGGAACACAGGCTCCGGTGCAGCTTGGGTCACTTCGC
GCTGCTGATGGCAAGGAGTGAAACACATTGTTTTGCTGTTTGTGCATAATAAAGTGAATCTCTTTTTCACGTACTAGCTACATTATAGTGGCAGA
ATAGAGGAATGTAGCATAATTATCTTCTCTTCAGCTGCTACTTGGGCAAATTATATGCTCCTGTGTGTAAGGGATGCCGTTTTGCTCCTGCTTAG
GTATCTAGCTATCAGTTTTCTCCTGCCTAGGTATCTAGCTCTCAGTTTGTGATGATGTAAGCCAATATAGCAGTTTGTGCCATGCTTGTCATTTG
CTCCTGCTGTTGGCATCTAATGAAGCTATCCACATTCTTCTGC
ATGAATGAAATGGCTGAGATTGTTCTTAGCTTCGAGGACAAGAAGCTGCCCATCCACCACATTCCTGGCCCTGAAGGTGTTCGTGGTCGTAATTC
CAATAACACTCTAATCAAGGAAAAACTTGGTTGGGCTCCGAGTATGAGACTCAAGGATGGGCTGAGAATTACATACTTTTGGATTAAAGAGCAAA
TTGAAAAGGAGAAAGGTCATGGTGTGGATTTATCAATCTATGGCACTTCTAAGGTGGTGGGAACACAGGCTCCGGTGCAGCTTGGGTCACTTCGC
GCTGCTGATGGCAAGGAGTGAAACACATTGTTTTGCTGTTTGTGCATAATAAAGTGAATCTCTTTTTCACGTACTAGCTACATTATAGTGGCAGA
ATAGAGGAATGTAGCATAATTATCTTCTCTTCAGCTGCTACTTGGGCAAATTATATGCTCCTGTGTGTAAGGGATGCCGTTTTGCTCCTGCTTAG
GTATCTAGCTATCAGTTTTCTCCTGCCTAGGTATCTAGCTCTCAGTTTGTGATGATGTAAGCCAATATAGCAGTTTGTGCCATGCTTGTCATTTG
CTCCTGCTGTTGGCATCTAATGAAGCTATCCACATTCTTCTGC
Unigenes |
Current Unigene builds | |||||
[SGN-E654777] | SGN-U616848 | Coffea canephora | Build 3 | 15 ESTs assembled | |
[SGN-E654777] | SGN-U630446 | Coffee species | Build 1 | 22 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T428202 [Download] [View] | Facility Assigned ID: cccl8m16.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |