Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E666878

Search information 
Request: 666878Match: SGN-E666878
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C412276Clone name: cccl28p11
nocartOrdering Not Available
Library Name: ccclOrganism: Coffea canephora

Tissue: LeafB
Development Stage: Young

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E666878Length: 727 bp (1030 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E666878 [] (trimmed) GGACCACCCCTTTTAATCTCTCTCTCTCTCTCTCTGCATTTCTTTAAATTCCCTCCGAATTAGCCGACAGATAGTCGTCAGATACCGGTCGTTTC
TAGCCGGGAAATCGATCAGATTCCGGCAATCTTCCCTCCTAGTCAACCTCAATGAATCCGGAATATGATTATTTGTTCAAACTGTTGCTTATTGG
AGATTCTGGTGTTGGAAAATCATGTCTTCTTCTGAGATTTGCGGATGATTCATATTCGGAAAGTTATATAAGCACCATTGGAGTTGATTTTAAAA
TACGTACTGTGGAACAAGATGGAAAGACTATTAAACTTCAAATTTGGGACACTGCTGGACAAGAACGTTTTAGGACCATCACTAGCAGCTACTAT
CGGGGAGCACATGGTATCATTGTGGTTTATGATGTGACAGATCAAGAAAGTTTCAACAATGTTAAGCAGTGGCTTAATGAAATTGATCGCTATGC
AAGTGAAAATGTTAATAAAATTCTAGTTGGAAATAAGTCCGATCTCACTGATAAGAAAGTTGTTTCCTATGAGACGGCTAAGGCATTTGCTGATG
AAATTGGTATTCCATTTTTGGAAACTAGTGCTAAAGATGCTACTAATGTGGAGCAAGCTTTCATGGCGATGTCTGCTGCCATAAAAAATAGGATG
GCAAGCCAACCAGCCATGAACAATGCTACGCCTCCCACAATTAATATGCGTGGGCAGCCTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E666878] SGN-U613188 Coffea canephora Build 3 7 ESTs assembled
[SGN-E666878] SGN-U630800 Coffee species Build 1 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T436139 [Download] [View] Facility Assigned ID: cccl28p11.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15