EST details — SGN-E671667
| Search information |
| Request: 671667 | Match: SGN-E671667 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C460334 | Clone name: cccs46w16d18 |
| ||
| Library Name: cccs46w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E671667 | Length: 798 bp (1040 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E671667 [] (trimmed)
GCTGAGACGACGTGGACGAAGCTCCCGTTAAATTCTCGCCGGGAAACTCAAAATCCCATCTACCCTTTTGCCTCCTCTCTTATCTCTTCGTGAAA
GTATCGATCCCGGAATTCTTTTTGTCCAGATAGCGTCATAATGAATCCAGAATACGACTATCTTTTTAAGCTTTTGCTCATTGGAGACTCTGGCG
TTGGCAAATCATGTCTGCTCTTGAGGTTTGCTGATGATTCATATCTGGAGAGCTATATTAGTACCATCGGGGTGGATTTTAAAATCCGCACAGTA
GAGCAGGATGGGAAAACCATTAAACTCCAAATTTGGGACACTGCAGGGCAATAACGTTTTAGGACAATTACAAGCAGCTATTATCGTGGCGCTCA
TGGTATCATTGTGGTTTATGATGTCACCGATCAAGAAAGCTTTAATAACGTAAAGCAGTGGCTGAATGAAATTGACCGATATGCAAGTGAGAATG
TGAACAAGCTTTTGGTTGGGAACAAGTGTGATCTTGAATCTCAAAGGGTAGTGGCATATGATACAGCCAAGGCTTTTGCAGACGAAATTGGGATT
CCTTTCATGGAAACAAGTGCAAAAAGTGCCACCAATGTTGAACAGGCTTTTATGGCAATGGCTGCCGAGATCAAGAATAGGATGGCAAGCCCACC
AGCAATGAACAATGCCCGACCACCTACCGTACAAATTCGAGGAACACCTGTAACCAAAAGTCTGTTGCTGCTCCACTGAAGAAATAGTGGATAAC
TGATGAGATGAAGCTATGCTGTGTTCTCATGGGTGTAA
GTATCGATCCCGGAATTCTTTTTGTCCAGATAGCGTCATAATGAATCCAGAATACGACTATCTTTTTAAGCTTTTGCTCATTGGAGACTCTGGCG
TTGGCAAATCATGTCTGCTCTTGAGGTTTGCTGATGATTCATATCTGGAGAGCTATATTAGTACCATCGGGGTGGATTTTAAAATCCGCACAGTA
GAGCAGGATGGGAAAACCATTAAACTCCAAATTTGGGACACTGCAGGGCAATAACGTTTTAGGACAATTACAAGCAGCTATTATCGTGGCGCTCA
TGGTATCATTGTGGTTTATGATGTCACCGATCAAGAAAGCTTTAATAACGTAAAGCAGTGGCTGAATGAAATTGACCGATATGCAAGTGAGAATG
TGAACAAGCTTTTGGTTGGGAACAAGTGTGATCTTGAATCTCAAAGGGTAGTGGCATATGATACAGCCAAGGCTTTTGCAGACGAAATTGGGATT
CCTTTCATGGAAACAAGTGCAAAAAGTGCCACCAATGTTGAACAGGCTTTTATGGCAATGGCTGCCGAGATCAAGAATAGGATGGCAAGCCCACC
AGCAATGAACAATGCCCGACCACCTACCGTACAAATTCGAGGAACACCTGTAACCAAAAGTCTGTTGCTGCTCCACTGAAGAAATAGTGGATAAC
TGATGAGATGAAGCTATGCTGTGTTCTCATGGGTGTAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E671667] | SGN-U616381 | Coffea canephora | Build 3 | 12 ESTs assembled | |
| [SGN-E671667] | SGN-U630799 | Coffee species | Build 1 | 24 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T484197 [Download] [View] | Facility Assigned ID: cccs46w16d18.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
