EST details — SGN-E672950

Search information 
Request: 672950Match: SGN-E672950
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C461617Clone name: cccs46w20f10
nocartOrdering Not Available
Library Name: cccs46wOrganism: Coffea canephora

Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E672950Length: 839 bp (1271 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E672950 [] (trimmed) GCAAGGAGAAGCCCGACCCTCCCCAGCCCCGATTCTGACGACTTCTTCAACCAACAAGTTCCAGATTTCGACCCCGTTCCTGTGATAGATTCCGA
GTGCATAAACCAGAAGAAGCTGGATGAAGCTTGTAGAGAGTGGGGTATGTTTCGGTTGATCAACCACGGGATTCCTCTGACCCTTTTGAACAAAC
TTCATGACCACGCCAAAAAGCTCTTTTCTCTCGCCTATGAATCCAAGCAAGCCTCTTTCACCCCTCCCATATCCTACTTTTGGGGCACCCCTGGC
CTCACCCCATCTGGTGTTGTCATACAAAGAGATGCTCGTGCCCAGAGCCAGAACTTCAACTGGCTCGAAGGTTTTCATGTTCTTTTAACTCCATT
ATCCCAGCTTCAATATGAAGATCCTATGCTCGACTCTTTCAGGTGCTTGCTGGAAGAATACGGGAGGCACCAGACTAGGCTGGCTACGACAATTT
TCGAGGCTCTGGCAAAGAATCTCCAATTGGATTCTGAACGTACAAGAGCTTATCTGTCGACAGCAACGGGACACCTACGAGTTCATCGCTACCCA
TGCTGCTTCGAGGCAGAGCAGTTGCGAGCATGGGGCATAGATGTCCACACTGACAGTTCTGTACTTTCCATTCTGCACGAAGATGAAGTCGGTGG
ACTTCAAGTCTGCTCCAATAATCAATGGTTCGACGTCAAGCCTCAATTCGATTCCCTGATTGTGAACCTCGGCGACATGATGCAGGCCATGAGCG
ATGACAATTATATTGGTGCCAAGCACAGAGTGAAGGTGAACAAGCACAAGGAAAAGATCTCGGTGGGCTATTTTGTGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E672950] SGN-U616909 Coffea canephora Build 3 3 ESTs assembled
[SGN-E672950] SGN-U629199 Coffee species Build 1 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T485480 [Download] [View] Facility Assigned ID: cccs46w20f10.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15