Notice: Due to a regional power outage, SGN was briefly unavailable on Saturday, Feb 4. We apologize for the inconvenience.

EST details — SGN-E673650

Search information 
Request: 673650Match: SGN-E673650
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C462318Clone name: cccs46w28f17
nocartOrdering Not Available
Library Name: cccs46wOrganism: Coffea canephora

Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E673650Length: 876 bp (1349 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E673650 [] (trimmed) GCAGCTTCGAGATAGATATGGCCAGATCGAGCTCGCAAACTCTCAGAGTACTCTTTTGCAGTCTACTCATCCTCGGACTAACAGCCGTTGCCCAG
GCTAAAAAATCAGACAATGACTTGAAAGAAGTGACTCACAAAGTTTACTTCGATGTCGAGATTGATGGAAGACCTGCTGGGCGGGTGGTGATGGG
TCTCTTTGGCAAAGCAGTTCCTAAGACAGCAGAAAATTTCAGAGCATTGTGCACAGGGGAGAAAGGTACTGGAAAGAGTGGGAAGCCTCTCCATT
ACAAAGGAAGCAAATTCCATAGAATCATCCCCAACTTCATGATTCAAGGTGGTGACTTCACCCTTGGTGATGGTAGGGGTGGGGAGTCAATTTAT
GGAGAGAAATTTGCTGATGAAAATTTCAAAATTAAGCATACCGGACCAGGCCTGTTGTCAATGGCTAATGCTGGTGCTGACACCAATGGTTCACA
GTTCTTCATAACAACTGTCACAACTAGCTGGTTGGATGGTCGGCATGTAGTCTTTGGTAAGGTCCTCTCTGGCATGGATGTAGTTTATGCGATTG
AAGCTGAAGGCAGGCAGAATGGAACGCCAAAAAGCGAAGTTAAAATTGCCGACAGTGGTGAACTTCCGTTATGATGAACTTCTGCTTAGGTGTCT
TTTTTTGTTCTGCTAACTGTTTGGGTTAGAATGGCTCAGTTGCAGTTGCATGATTCTGTATTAGTAGACCCTCGTTTCTTGTGCCGGTTTCAAAC
TTCATAACTTTTTATTATGGAGCTCTTTGAAGCATTATCTTTTTGTTTTCTTGAACGAGCAGTCATTGTTCTAAAGTTATATTTAACTTGTTAAA
TTGCAGGAGTAAAATAATGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E673650] SGN-U613643 Coffea canephora Build 3 14 ESTs assembled
[SGN-E673650] SGN-U634325 Coffee species Build 1 60 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T486181 [Download] [View] Facility Assigned ID: cccs46w28f17.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15