EST details — SGN-E674030
| Search information |
| Request: 674030 | Match: SGN-E674030 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C462698 | Clone name: cccs46w25e2 |
| ||
| Library Name: cccs46w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E674030 | Length: 798 bp (1633 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E674030 [] (trimmed)
TATGGGCATGTCTGTTCATAAATGAACATTTAGGCACAGGAACGATTTTGCCCACTGAGATGGGTGCCGCTGTCAAAGAAATCTTTAGGAGTGGG
AGAAAATTGGGTGGAAGAGGCAGAAGTCCGTTGATGTTTGAGTGGTATGGTGAAAAGTACTGGGGTGCTGCCCATGGTTTGGCTGGAATCATGCA
TATTTTATTGCACTTTGAACTGAAGGCACATGAGCGTGAAGAGGTCAAGGAAACTCTTAATTACATGATAAAGAACCGGTTCCCTGGTGGGAACT
ATCCTGCAAGTGAAGAAGATAAAAGGAGGGATGTTCTGGTGCACTGGTGTCATGGGGCTCCTGGAATTGCACTAACACTTGTAAAGGCTGCTGAG
GTTTTTGGAGATAAAAGATTTCTCCAAGCAGCTATAGATGCAGCAGAGGTTGTTTGGAATCGTGGACTTCTAAAGCGAGTCGGAATATGTCATGG
GGTCAGTGGCAATACTTATGCCTTCCTCGCTCTTTATCGACTGACTGGAAATGTGGAGTTTCTATATCGAGCAAAGGCCTTCAGTTGCTTTTTGC
TCGATAGAGCCTACAAACTTATATCCAAAGGAGAGATGCATGGAGGGGATAGCCCATACTCACTCTTTGAAGGAATTGGGGGTATGGCTTATCTT
TTTCTGGACATGGTTGAACCTACTAATGCTAGATTCCCTGCTTATGAACTTTAAGCATTTGCATCGCGGGCAGAAAAGATAGATCTATGGAAAAT
GATGGTTGTCATGTATAAAAAAACTAGTTTCTCCCTGT
AGAAAATTGGGTGGAAGAGGCAGAAGTCCGTTGATGTTTGAGTGGTATGGTGAAAAGTACTGGGGTGCTGCCCATGGTTTGGCTGGAATCATGCA
TATTTTATTGCACTTTGAACTGAAGGCACATGAGCGTGAAGAGGTCAAGGAAACTCTTAATTACATGATAAAGAACCGGTTCCCTGGTGGGAACT
ATCCTGCAAGTGAAGAAGATAAAAGGAGGGATGTTCTGGTGCACTGGTGTCATGGGGCTCCTGGAATTGCACTAACACTTGTAAAGGCTGCTGAG
GTTTTTGGAGATAAAAGATTTCTCCAAGCAGCTATAGATGCAGCAGAGGTTGTTTGGAATCGTGGACTTCTAAAGCGAGTCGGAATATGTCATGG
GGTCAGTGGCAATACTTATGCCTTCCTCGCTCTTTATCGACTGACTGGAAATGTGGAGTTTCTATATCGAGCAAAGGCCTTCAGTTGCTTTTTGC
TCGATAGAGCCTACAAACTTATATCCAAAGGAGAGATGCATGGAGGGGATAGCCCATACTCACTCTTTGAAGGAATTGGGGGTATGGCTTATCTT
TTTCTGGACATGGTTGAACCTACTAATGCTAGATTCCCTGCTTATGAACTTTAAGCATTTGCATCGCGGGCAGAAAAGATAGATCTATGGAAAAT
GATGGTTGTCATGTATAAAAAAACTAGTTTCTCCCTGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E674030] | SGN-U614130 | Coffea canephora | Build 3 | 5 ESTs assembled | |
| [SGN-E674030] | SGN-U633454 | Coffee species | Build 1 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T486561 [Download] [View] | Facility Assigned ID: cccs46w25e2.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
